[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56949.1
DDBJ      :             putative glutamine amidotransferase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  436/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
d.153.1
:299 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   119->241 1xffB PDBj 3e-13 33.6 %
:RPS:PDB   2->44 1ao0A PDBj 3e-05 20.9 %
:RPS:PDB   119->298 2bplA PDBj 4e-22 27.4 %
:RPS:SCOP  2->44 1jxaA2  d.153.1.1 * 1e-04 48.6 %
:RPS:SCOP  116->293 1ao0A2  d.153.1.1 * 1e-24 26.6 %
:HMM:SCOP  2->299 1ecfA2 d.153.1.1 * 1.5e-45 35.9 %
:RPS:PFM   146->228 PF00310 * GATase_2 3e-08 32.9 %
:HMM:PFM   145->270 PF00310 * GATase_2 7.4e-11 25.6 121/362  
:BLT:SWISS 1->299 GLXB_RHIME 8e-69 51.7 %
:PROS 55->66|PS00136|SUBTILASE_ASP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56949.1 GT:GENE BAD56949.1 GT:PRODUCT putative glutamine amidotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2275086..2275985) GB:FROM 2275086 GB:TO 2275985 GB:DIRECTION - GB:PRODUCT putative glutamine amidotransferase GB:PROTEIN_ID BAD56949.1 LENGTH 299 SQ:AASEQ MCGIVGLHLRDATLYPRLGALLTGMLDQLCDRGPDSAGMAVYGDPTWSPPGESTVSLLDAGLPAADLAARLTAALGVPVTGLDLAPTTVLHAPLDAAALSAAVPDIAPHARVIGFGTDLTVLKGVGHPTALAHRFGLPAAAGWQGVAHTRMATESAVTAAGSHPFSVGPDQCLVHNGSFSNHRSVQHELRRAGVVFDSDNDTEVGARFIAAQLAQGVDLEKALTLLNERFDGFYTLLVADSESFAVVRDPIACKPAVVAETDRWVAMASEYRALADLPGVADAHIFEPEPEEVYLWHRQ GT:EXON 1|1-299:0| BL:SWS:NREP 1 BL:SWS:REP 1->299|GLXB_RHIME|8e-69|51.7|296/301| PROS 55->66|PS00136|SUBTILASE_ASP|PDOC00125| SEG 57->75|lldaglpaadlaarltaal| SEG 90->108|lhapldaaalsaavpdiap| BL:PDB:NREP 1 BL:PDB:REP 119->241|1xffB|3e-13|33.6|122/239| RP:PDB:NREP 2 RP:PDB:REP 2->44|1ao0A|3e-05|20.9|38/455| RP:PDB:REP 119->298|2bplA|4e-22|27.4|175/608| RP:PFM:NREP 1 RP:PFM:REP 146->228|PF00310|3e-08|32.9|82/175|GATase_2| HM:PFM:NREP 1 HM:PFM:REP 145->270|PF00310|7.4e-11|25.6|121/362|GATase_2| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00310|IPR000583| RP:SCP:NREP 2 RP:SCP:REP 2->44|1jxaA2|1e-04|48.6|37/240|d.153.1.1| RP:SCP:REP 116->293|1ao0A2|1e-24|26.6|169/230|d.153.1.1| HM:SCP:REP 2->299|1ecfA2|1.5e-45|35.9|217/0|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| OP:NHOMO 590 OP:NHOMOORG 503 OP:PATTERN 11-111-1111111111-1111112223221212211-1111211-1-111-12---1111-111-1- --1--1222221-111111-11111311111122221-23-1--1111111-111-1-----111111111--------12-1-------11----1------1-1------------------------------111----111-----------1--1-1----------------------11112-1----------1------------------------------1--------------1--------------------------------------------------------------------------11---111111----1---1---2-1-1--111---1--3--1--1111----111------1112112111121------------11-11-11-3--21122223324311--12-111111-111111111-11123-1--1--------------------------21111211111222222-------2211-1-123-112111111111111----11111212-111111111111211---1-22--1111--1--111-2--1-1111-------------1111-11-------11-1111121111111111111111111111-1-1121--11111--11-1111111111-11-1111111111111111111--111111111111111111111111111-1111111111111--11111-1-----1111-------111-11-1111-112----1111111-2212111221---------111111111111111121-1--11111111------------------1-----------------------------1-11111--- --11-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---11-----12111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 77.6 SQ:SECSTR EcEEcEEEETTccccHHHHHHHHHHHTccGGGccccTTcccccc###################################################################EEcTTccEEEEEEEccHHHHHHHHHHccccccEEEEEEEccccccccGGGcccEEETcTEEEEEEEccTTHHHHHHHHHHHTcccccccHHHHHHHHHHHHHTTcccHHHHHHHHGGGccccEEEEEEETTcTTcEEEEEEccccEEEEccccEEEEccGGGTTTTcHHHHcEEEEccTTcEEEEccE DISOP:02AL 299-300| PSIPRED ccEEEEEEEcccccccHHccHHHHHHHHHHHccccccEEEEcccccccccEEEEEEEcccccccHHHHHHHHHHcccccEEEEccHHHHHHHccHHHHHHHHHHcccccEEEEEccccEEEEEccccHHHHHHHcccccccccEEEEEEEccccccccccccccEEEcccEEEEEEEEEccHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEEEEccEEEEEEEccccccEEEEEEccEEEEEEcHHHHHccccccEEEEEEccccEEEEEEcc //