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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56951.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  249/915 : Eukaryota  93/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->45 2iveB PDBj 3e-04 50.0 %
:BLT:PDB   20->376 1y56B PDBj 2e-31 30.5 %
:RPS:PDB   2->383 1b3mA PDBj 7e-40 17.7 %
:RPS:SCOP  1->271 1ng3A1  c.3.1.2 * 2e-23 19.5 %
:HMM:SCOP  4->377 1pj5A2 c.3.1.2 * 4e-52 41.4 %
:RPS:PFM   8->354 PF01266 * DAO 1e-31 35.9 %
:HMM:PFM   7->356 PF01266 * DAO 2.9e-75 33.7 344/358  
:BLT:SWISS 8->372 M2GD_RAT 8e-29 29.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56951.1 GT:GENE BAD56951.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2277402..2278592) GB:FROM 2277402 GB:TO 2278592 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD56951.1 LENGTH 396 SQ:AASEQ MTESHTYVIVGGGLEGLAIAWSLAERGETDVVVLERATLCSGMTGKSSGVVRCHYGVPALAAMSWYGLDLFTHASEILGDDLGFQQCGYVVGVGPENVDPLRANVAMMRDLGIDVQLVDHDAVRELWPGLHTADFAAFAYEPLGGRGDAYLAGMAFATAARRLGVRIRQSTPVTALLQRESGAVYGVRLADGAEIHGGTVVLAAGPWSPALAATAGVDLDIKAQRAQLVTVDQGAPTPVVPVLSDLAGLSYVCREPNGELLVGNSDHSAPRYIDPDRYVNRADESTVGTVVAKLGHRLPDMPDPRITGSYVGAYDVTPDYNPIIGPAPAEGLFLAAGFSGHGYKISPAVGHLVADLLTKGTTDLPHVDPRDFRYERFAEGEPLLSRHPYAGAGEMR GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 8->372|M2GD_RAT|8e-29|29.8|359/857| BL:PDB:NREP 2 BL:PDB:REP 9->45|2iveB|3e-04|50.0|36/450| BL:PDB:REP 20->376|1y56B|2e-31|30.5|344/374| RP:PDB:NREP 1 RP:PDB:REP 2->383|1b3mA|7e-40|17.7|373/385| RP:PFM:NREP 1 RP:PFM:REP 8->354|PF01266|1e-31|35.9|343/354|DAO| HM:PFM:NREP 1 HM:PFM:REP 7->356|PF01266|2.9e-75|33.7|344/358|DAO| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 1 RP:SCP:REP 1->271|1ng3A1|2e-23|19.5|262/276|c.3.1.2| HM:SCP:REP 4->377|1pj5A2|4e-52|41.4|268/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 979 OP:NHOMOORG 362 OP:PATTERN --1-111-------1-11-----11111--1-----------------------2222222------- -12-1-----2-1--------2--13------2313134611----111---2321------5-3343-12-----------3--1----------------------1---------------------------23321---15-12111111-----11-111---1-------------1---1------------1--11----1111--1-1-12-1-11111112-----------------11------------------------------------------------------------------------------------------------------------1---1------1--1--1--1------1313---11-11-1111111113-221223224H--B4433394366783--14984435A9I111111112-1-2-21-----------------------------6-24--122218785B56333366BA55552575A113---1151--111-6236----1-1-------------3---3-----1---------------111132---------------------------11----1-2------------------1----------1--------11--2-------------------------------------1-----------------------------------------------------134---------------------1---1-32223227323212466---------1-------------1----------------1-------------------------------------------111-1-1------ ------2--------1----1--2222-------1---------------24-2-11-------------------------------------114111-------25-F254654222-331251728a41446211153235212125115233423822422-326-12531---------2--11--2311-12 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 396 STR:RPRED 100.0 SQ:SECSTR cccEEEEEEEcccHHHHHHHHHHHHTTcccEEEEcccccccccccccccEEEEccccTTHHHHHHHHHHHHHHHHHHcccccEEcccEEEEEEETTccHHHHHHHHHHHHHTcccEEEETHHHHHHcTTccccTTEEEEEETTcEEEEHHHHHHHHHHHHHHTTcEEEccccEEEEcEccTTcEEEEEETTTEEEEEEEEEEccGGGHHHHGGGGTEEcccEEEEEEEEEEcccHHHHcGGGTEETTEEEEEEcccTTccEEEEEcccEEccTTTccccTTccTHHHHHHHHHHHHHcGGGGcccEEEEEEEEEEEcTTcccEEEEETTEEEEEEEccTTccGGGHHHHHHHHHHHHHHccHHHcccccGGGcTTcGGGccEEccTTcccTTcccE DISOP:02AL 1-2, 393-396| PSIPRED ccccccEEEEcccHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccEEEEEEEccccEEcHHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEEEEEccccEEEEcEEEEEccccHHHHHHHccccEEEEEEcEEEEEEcccccccccEEEEccccEEEEEEccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEEEccccccEEEEccccccEEEEEEcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc //