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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56958.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  214/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:165 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->154 2gmyB PDBj 7e-16 30.7 %
:RPS:PDB   13->162 3c1lB PDBj 2e-16 14.6 %
:RPS:SCOP  17->157 2gmyA1  a.152.1.3 * 5e-19 30.7 %
:HMM:SCOP  15->158 2o4dA1 a.152.1.3 * 2.1e-41 43.6 %
:RPS:PFM   42->87 PF02627 * CMD 2e-06 39.1 %
:HMM:PFM   25->106 PF02627 * CMD 3.7e-20 30.9 81/85  
:HMM:PFM   101->159 PF06059 * DUF930 0.00073 23.7 59/101  
:BLT:SWISS 17->151 YDFG_BACSU 1e-17 34.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56958.1 GT:GENE BAD56958.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2283909..2284406) GB:FROM 2283909 GB:TO 2284406 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56958.1 LENGTH 165 SQ:AASEQ MTTDTVTTENAAELPVRLRWAEHVPDIYRAMVELEGAVRRSIEPTLHELVKIRASQLNHCAFCLDMHTKDALAAGMPVERIIQLSAWEESRHFYTERELAALALTEAVTVLTDGFVPDEVYAEAAAHFSEPELATLIAAIATINAWNRFGVTCRMTPGHYHPRPH GT:EXON 1|1-165:0| BL:SWS:NREP 1 BL:SWS:REP 17->151|YDFG_BACSU|1e-17|34.3|134/147| SEG 95->112|terelaalalteavtvlt| SEG 133->143|latliaaiati| BL:PDB:NREP 1 BL:PDB:REP 14->154|2gmyB|7e-16|30.7|140/146| RP:PDB:NREP 1 RP:PDB:REP 13->162|3c1lB|2e-16|14.6|144/177| RP:PFM:NREP 1 RP:PFM:REP 42->87|PF02627|2e-06|39.1|46/83|CMD| HM:PFM:NREP 2 HM:PFM:REP 25->106|PF02627|3.7e-20|30.9|81/85|CMD| HM:PFM:REP 101->159|PF06059|0.00073|23.7|59/101|DUF930| RP:SCP:NREP 1 RP:SCP:REP 17->157|2gmyA1|5e-19|30.7|140/147|a.152.1.3| HM:SCP:REP 15->158|2o4dA1|2.1e-41|43.6|140/0|a.152.1.3|1/1|AhpD-like| OP:NHOMO 333 OP:NHOMOORG 215 OP:PATTERN -------------------------------------------------------------------- 12--4---------2------1---2------21112155-121---1---------1----1-1-3443------------1------------------3---312-2------------------------------------1-------------------1--------------------------------------------11-1--2---1---------12---------------1---1------------------------------------------------------------------------------------------------------------------------1--1--1-----2-5111-21-11-----------1-11--11--121-111-2333632211-----11-11-11------------------------------------------------11--33224433341111133342222123212352--11----221-2-3--1-----1----------12---------------------1----111122---------------------------111---1-111--11111--11111--1-11--------------11---1--111-111---1---111-1-111-----1111111--1-111111111111111--1------1----------------------------1---------------------------11111-221-1121----------------1-------11-22---------------------------------------------------------------------2- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 93.3 SQ:SECSTR ########HHHccccHHHHHTTTcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHccHHHHHHHcGGGcccGcccccHHHHHHHHHHHHHHcGGGccHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHTcccGGGTT### DISOP:02AL 158-165| PSIPRED cccccccHHcccccccHHHHHHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc //