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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56961.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  393/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:402 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->388 1pw4A_ f.38.1.1 * 5.1e-53 29.0 %
:HMM:PFM   8->321 PF07690 * MFS_1 1.9e-34 25.3 312/353  
:BLT:SWISS 5->329 YDHP_ECOLI 2e-37 31.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56961.1 GT:GENE BAD56961.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2286426..2287634 GB:FROM 2286426 GB:TO 2287634 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD56961.1 LENGTH 402 SQ:AASEQ MPIGLVALAIGSFGIGLTEFVIMGLLPEVAADFGVTEAAAGWLISGYALSVVVGALGLTAATTRLPRKAVLLGLLGLFILGNALSALAPTYETMMAGRVVAALCHGAFFGIGAVVAASLVAPAKKAGAVAVMFTGLTVANVLGVPFGTFLGQEHGWRATFWAITAIGVLALIGIAVLVPATAGARAAGAAPGLRAELRAFTSGQVWLSLIVTVLGYGGMFGAFTYIAYTLTEVSGFAASTVPWLLVLFGLGLFVGNWAGGRLADRSLDGTLLGFVAALTVVLVVFASVAAHPVPTVAALILMGGFSFGTVPGLQTRIMHYAAGAPTLASGANIGAFNLGNALGAWAGGLAISAGFGYTSPIWVGAGITLAALAVMGFAASTARRARADAVTAPRAVEVPVAG GT:EXON 1|1-402:0| BL:SWS:NREP 1 BL:SWS:REP 5->329|YDHP_ECOLI|2e-37|31.8|321/389| TM:NTM 11 TM:REGION 4->26| TM:REGION 36->58| TM:REGION 69->91| TM:REGION 97->119| TM:REGION 128->150| TM:REGION 159->181| TM:REGION 204->226| TM:REGION 234->256| TM:REGION 279->301| TM:REGION 336->357| TM:REGION 360->382| SEG 71->84|llgllglfilgnal| SEG 106->117|gaffgigavvaa| SEG 120->131|vapakkagavav| SEG 175->199|avlvpatagaraagaapglraelra| SEG 244->255|llvlfglglfvg| SEG 270->290|tllgfvaaltvvlvvfasvaa| SEG 330->354|ganigafnlgnalgawagglaisag| SEG 378->396|aastarraradavtaprav| HM:PFM:NREP 1 HM:PFM:REP 8->321|PF07690|1.9e-34|25.3|312/353|MFS_1| HM:SCP:REP 1->388|1pw4A_|5.1e-53|29.0|386/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 864 OP:NHOMOORG 394 OP:PATTERN -------------------------------------------------------------------- -----111112213211----1---3------11113633----22341221334113----1-225234-1111211--2---------21-1-------1-111---1-----------------------------------------------------------------------------------522222212-131123112233113--1211211111-A4-1112111-111111322231-3----1---1122111-1--2111----------------------------------------------------------------------1--------------------------3----11-13-42----1-1------------2-1121111114--42212114221332-1--11-------2222222212231--1--------------------------------1-1232253885753333366443334336634442--112-1311311-3222--1-12------------2-1-------11----11-1--------------11----------1--------------11-21--1-1111111-2-311----111--------------2311-433333333333-333333333333333333246412---3233333333323233633133331-211111111111----------------14-------11-1----22222131116133232568243451665--1111-1--1--1-----1-2--35222221111------1------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 180-195, 379-394| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccc //