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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56965.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  339/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.61.6
:179 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   15->150 1wubA PDBj 7e-16 34.8 %
:RPS:SCOP  13->177 1y0gA  b.61.6.1 * 3e-36 31.9 %
:HMM:SCOP  13->178 1wubA_ b.61.6.1 * 1.9e-35 40.6 %
:RPS:PFM   15->174 PF04264 * YceI 3e-16 42.5 %
:HMM:PFM   14->175 PF04264 * YceI 9.3e-33 36.0 150/159  
:BLT:SWISS 21->148 Y1570_ENT38 5e-18 39.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56965.1 GT:GENE BAD56965.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2290453..2290992 GB:FROM 2290453 GB:TO 2290992 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56965.1 LENGTH 179 SQ:AASEQ MTTSTNDTLLKTGSWALDTAHSAVGFTIRHLGIAKVRGRFTRFETEFVVDETGAATVGATIHLDSFDTGNPDRDAHVRAADFLDVANRPTLTFRADSPVRVAETFTVAGVATLGERSTPVELEVEWGGVQEFPGTGNRHAGFSATGVIDRTALGVGPTAPGLLANSVRIELDIQLIEPA GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 21->148|Y1570_ENT38|5e-18|39.4|127/192| BL:PDB:NREP 1 BL:PDB:REP 15->150|1wubA|7e-16|34.8|135/176| RP:PFM:NREP 1 RP:PFM:REP 15->174|PF04264|3e-16|42.5|153/161|YceI| HM:PFM:NREP 1 HM:PFM:REP 14->175|PF04264|9.3e-33|36.0|150/159|YceI| RP:SCP:NREP 1 RP:SCP:REP 13->177|1y0gA|3e-36|31.9|163/169|b.61.6.1| HM:SCP:REP 13->178|1wubA_|1.9e-35|40.6|165/0|b.61.6.1|1/1|YceI-like| OP:NHOMO 405 OP:NHOMOORG 342 OP:PATTERN --------------------------------------------------------------11---- 2211211111-1111------1---1------111121211211221111-1132111----2-1114532----------------------------2-1--1433-2------------------1-----1-11111----1----------------------------------------11---1--------------------------1111111111111-111111111111111111111--------------------------------------------------------------------------------------------------1---------------------1--1331------1------1----------------11-1--12--1-------2-----1-111-------1-1---------11---11--------------------------------1-------------11111--221111-1--21111-1--1111-1--------11---1-----------111311---111------222-1---233443---2-11-111-1111111111111---11111112111111111121-11111--1111----1--------11-1-111111111111-111111111111-111111---111111111111111111111-1111111--11-111-11111---1----------1111----------------------12-1-11111---111111111---------1---11111111111--111111111111---------------------------------------------------------2- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 137 STR:RPRED 76.5 SQ:SECSTR ##############EEEcGGGcEEEEEEEETTTEEEEEEEEEEEEEEEEcTTcEEEEEEEEEEEEEEcccHHHHHHHHcTTTTcTTTccEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEcccEEcTTTccEEEEEEEEEEEEGG############################ PSIPRED cEEEccccccccEEEEEcccccEEEEEEEEccEEEEEEEEccEEEEEEEcccccEEEEEEEEcHHEEcccHHHHHHHccHHcccHHHccEEEEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEHHHHcccccccEEEEEEEEEEEEEEEEEcc //