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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56966.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:321 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  254->298 1ixcA1 a.4.5.37 * 0.00083 35.7 %
:HMM:PFM   258->298 PF00126 * HTH_1 9.6e-09 34.1 41/60  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56966.1 GT:GENE BAD56966.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2291003..2291968) GB:FROM 2291003 GB:TO 2291968 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56966.1 LENGTH 321 SQ:AASEQ MFYDTLMRRRVDLPALARASAALAECVAGIRLHGTGRVIRFGPDGRSAQTPPPAAAGTPVTLDDEEIGTVWLERTGPSRALDEMLLDRFALAVATVVERYGPARTTMADPALVELVIGADSDEAARARALRLLGFAADLPVRVAAVRSPQPLDRIGGSVCPGRPVKAATVGGVGVLLATTLDATGFPPDTLAGLGTAAELGRAWWEARTALRFATARRPVVDFGDLGSLALLAQVPRDALRDNADVAAVAAIAADQDALDTLDAYCATGSVRRAADLLHLHHSSVARRVEALGRGLGIDPTEPTGLLRARLALAAWRLLAD GT:EXON 1|1-321:0| SEG 13->28|lpalarasaalaecva| SEG 48->61|aqtpppaaagtpvt| SEG 119->139|adsdeaararalrllgfaadl| SEG 207->218|artalrfatarr| SEG 238->264|dalrdnadvaavaaiaadqdaldtlda| SEG 306->320|llrarlalaawrlla| HM:PFM:NREP 1 HM:PFM:REP 258->298|PF00126|9.6e-09|34.1|41/60|HTH_1| HM:SCP:REP 254->298|1ixcA1|0.00083|35.7|42/0|a.4.5.37|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 45-46,48-48,53-54,59-60,62-62,109-109,115-116,118-118,123-124,129-130,132-132,137-137,165-165,171-172,174-174,179-179,193-193,199-200,202-202,207-208,213-214,216-216,221-222,227-227,230-230,235-235,241-241,244-244| PSIPRED cHHHHHHHHHcccHHHHHHHHHHHHHHcccEEcccccEEEEccccccccccccccccccEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcHHHHHHccccHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcc //