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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56977.1
DDBJ      :             putative halogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  133/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:492 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->400 3e1tA PDBj 5e-59 39.4 %
:RPS:PDB   21->357 3c96A PDBj 5e-24 15.5 %
:RPS:SCOP  124->357 3c96A1  c.3.1.2 * 9e-11 15.6 %
:HMM:SCOP  3->365 1k0iA1 c.3.1.2 * 2.1e-44 31.0 %
:RPS:PFM   97->350 PF04820 * Trp_halogenase 4e-27 43.2 %
:HMM:PFM   7->83 PF04820 * Trp_halogenase 1.2e-14 33.8 77/454  
:HMM:PFM   95->381 PF04820 * Trp_halogenase 1.2e-30 25.4 240/454  
:BLT:SWISS 99->352 GGR2_METTH 6e-12 25.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56977.1 GT:GENE BAD56977.1 GT:PRODUCT putative halogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2300624..2302102 GB:FROM 2300624 GB:TO 2302102 GB:DIRECTION + GB:PRODUCT putative halogenase GB:PROTEIN_ID BAD56977.1 LENGTH 492 SQ:AASEQ MGNNPHVVVVGGGPGGSTTAALLARAGIRVTLLERDRFPRYHIGESLLASCLSTLRLSGAYDKVAAHGFQIKRGGYFQWQDDNWLLDWSQLVDAEAWSYQVERAAFDEILLRNAAEQGATVIEGATVTDVVFEGDRPVAVEWKAAGEDEIRTIPCDFLVDASGRYGLLANRRFGMRRQHPAFRNVAVWSYWRGAHLHPDSPEGAINVVSTPEGGWFWHIPLSDGRFSVGYVISARTAGEALRTKGRDTYYRDTIAASKAMSELLAGAEQVAEVRAEQDYSYVSDRFAGPGYVIVGDAAAFLDPLLSTGVHLATYGGLVAAAAIATSLRGEMSEQDALAFYEHTARRAYSRFLVLVSRMYEQYIGSEEYFAHAAKLTEVHEGDTPEVSFTRIMAGLTDVEESAGSQQRTSTQAIVAEAERLHDESANLEYMGHLDMSVVWDHWRDPLADTVMDGVRITTEPVLGLTGRPRTAEEIAAVARPVIPPKAAGVAGR GT:EXON 1|1-492:0| BL:SWS:NREP 1 BL:SWS:REP 99->352|GGR2_METTH|6e-12|25.9|239/385| SEG 2->16|gnnphvvvvgggpgg| BL:PDB:NREP 1 BL:PDB:REP 17->400|3e1tA|5e-59|39.4|376/437| RP:PDB:NREP 1 RP:PDB:REP 21->357|3c96A|5e-24|15.5|329/381| RP:PFM:NREP 1 RP:PFM:REP 97->350|PF04820|4e-27|43.2|222/268|Trp_halogenase| HM:PFM:NREP 2 HM:PFM:REP 7->83|PF04820|1.2e-14|33.8|77/454|Trp_halogenase| HM:PFM:REP 95->381|PF04820|1.2e-30|25.4|240/454|Trp_halogenase| RP:SCP:NREP 1 RP:SCP:REP 124->357|3c96A1|9e-11|15.6|212/269|c.3.1.2| HM:SCP:REP 3->365|1k0iA1|2.1e-44|31.0|248/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 201 OP:NHOMOORG 153 OP:PATTERN -------------------------------------------------------------1------ ----3--1------1---------------------3111-3321-------111-----3---111---1-----------1-----------------1111-211------------------1-------------------2-------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-2--------------1-----------------------------1----1----------1-----------------------11------------------------------------------11----1-1-----11111111-111111--111-1-----1-2-1-11-----1----------21----------------------------11---------------------------11-----1-1-1-11111-1111111112111---------------------------------------------------------------------------------------------------1---------1--12----2-------11---11--1--------12311--111-1111---------1111------11111111111111--------------------------------------------------------------- -------------------3---4132------1-1----------1-22--2----3-------------------------------245-431--------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 78.0 SQ:SECSTR ################HHHHHHHHTTccEEEEEEccccccccccEEEEcHHHHHHHHTTcHHHHHHHcEEEcEEEEEcTTccEEEEEcGGGGTccccEEEEEHHHHHHHHHHHHHHHHcTTcEcEEEEEEEEETTEEEEEEEEEETTccEEEEEEcEEEEcccTTcHHHcHHHcTTccccEEEEEEEEEEEEEEcccTTccEEEEccEEEEEEccHHHHTTTcEEEEEEEEEEHHHHccccccccTTccccHHHHHHHHTTccHHHHTccEEEEEEEEEcccccccccTTEEEcTHHHHcccccTTcTHHHHHHHTHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHTTcHHHHHHHHHHHHccccTTc############################################################################################ DISOP:02AL 490-492| PSIPRED cccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHcccHHHHHHccccEEEEEEEEEcccEEEEcccccccccccEEEEEHHHHHHHHHHHHHHcccEEEEccEEEEEEEEcccEEEEEEEccccccEEEEEEEEEEEEccccHHHHHHHccccccccccccEEEEEEEEccccccccccccEEEEEEccccEEEEEEccccEEEEEEEEccccccHHcccccHHHHHHHHHHHcccHHHHHcccccccccEEEccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHcccccHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHccccccccccccc //