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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56983.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  421/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:320 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  206->281 2onkC1  f.58.1.1 * 8e-04 10.5 %
:HMM:PFM   117->313 PF00528 * BPD_transp_1 7.5e-28 33.3 180/185  
:BLT:SWISS 7->313 Y4TP_RHISN 7e-22 25.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56983.1 GT:GENE BAD56983.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2308285..2309247 GB:FROM 2308285 GB:TO 2309247 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD56983.1 LENGTH 320 SQ:AASEQ MPPFARFVLRRTGIGVLQLGILLALVFGLSLLMPGDAADVQSNDVLGEDQRAVARELLGLDVAPVQRFLTWLANAATGDFGTSYASGARVSDLVAGPLRTSAVLAVLALAVLMPVVVVAGFAAGLHPGSRRDRAITTISIGFDSVPDFVLAVLLVSYVAIDLDLLPATFLGADADTVLRHPEYLVLPLIVIVARVAAPLVRLVRAGVIDVLHEPYIAQARRLGVGRLSLLARHIAPNALAPAMQELGRTGDGLLSGVLIVEAVFVVPGLASELIGAIGNRDEPVVLAIVAITGTAAIVLNLVIDVLGERMVPRSAEGRRG GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 7->313|Y4TP_RHISN|7e-22|25.4|307/313| TM:NTM 6 TM:REGION 15->37| TM:REGION 99->121| TM:REGION 137->159| TM:REGION 181->203| TM:REGION 253->275| TM:REGION 286->308| SEG 102->119|avlavlalavlmpvvvva| SEG 184->205|lvlplivivarvaaplvrlvra| SEG 284->299|vvlaivaitgtaaivl| HM:PFM:NREP 1 HM:PFM:REP 117->313|PF00528|7.5e-28|33.3|180/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 206->281|2onkC1|8e-04|10.5|76/252|f.58.1.1| OP:NHOMO 994 OP:NHOMOORG 432 OP:PATTERN --1---------------------1--31--1------------1--3--543-1------------- -1-21--2111-1---1----1---4------21111546-1-2212--1--1111--11221-124133-----1-12---1-----------------------------------1-1111--11---1-111322-11111311----1----------1--1111-------------4---1---1135555544535454445344316441-2512-11111291111111111111111-11-11212112--1-----22-11------1111-------11-------1-------------1---------13-412223342-2-2-------11-314---1532----31-2111--111------------546--22113-44434433447-333323249D--GBBB6667749891--11355254234--------1---11-3-------------------------------1---36466212222111111134-111-11252274--112-13--1-6458-----2-2------------1-2-2-1--221---1--1----1------------1-------1----------2----------1--------------------------1----------22751332222222222-2222222222222222221333652221111111111111111311222221-111121212222--1------------213----11-11111---------1---1------3-2-1----2221----1---1-11-222221--22-----------------1--------------3-1---------1----------1----------1----11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 316-320| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccc //