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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56990.1
DDBJ      :             putative ABC transporter membrane protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:267 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   18->223 PF01061 * ABC2_membrane 2e-06 24.5 %
:HMM:PFM   15->222 PF01061 * ABC2_membrane 3.3e-29 25.0 196/208  
:BLT:SWISS 38->263 DRRB_STRPE 3e-21 31.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56990.1 GT:GENE BAD56990.1 GT:PRODUCT putative ABC transporter membrane protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2315631..2316434 GB:FROM 2315631 GB:TO 2316434 GB:DIRECTION + GB:PRODUCT putative ABC transporter membrane protein GB:PROTEIN_ID BAD56990.1 LENGTH 267 SQ:AASEQ MTSLAPRTSGMIDDIRTITRRNLTHWVNRPATVVVGWLFPVMVILMFGTLFGGAIETPGNGRYYEYLMPGMFAMTMLFGLESTMAAVAADAAKGVTDRFRSLPMSSAAVVAGRCAADLLNTVIALAVVVGTGLAVGWQWHHGLGDALAAVALLLMLRFALLWVGIYLGLVVAGPESVAVVQVLVWPLLFLSNAFVDTATMPRWLGTIADWNPLSATASAVRALCGNPGWSGASWISAHSVAAAVLWPLLITAVFLPLAVRRFRALGN GT:EXON 1|1-267:0| BL:SWS:NREP 1 BL:SWS:REP 38->263|DRRB_STRPE|3e-21|31.3|217/283| TM:NTM 5 TM:REGION 32->54| TM:REGION 110->132| TM:REGION 146->168| TM:REGION 178->200| TM:REGION 238->259| SEG 85->92|aavaadaa| SEG 121->136|tvialavvvgtglavg| SEG 143->161|lgdalaavalllmlrfall| RP:PFM:NREP 1 RP:PFM:REP 18->223|PF01061|2e-06|24.5|196/208|ABC2_membrane| HM:PFM:NREP 1 HM:PFM:REP 15->222|PF01061|3.3e-29|25.0|196/208|ABC2_membrane| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF01061|IPR013525| OP:NHOMO 90 OP:NHOMOORG 49 OP:PATTERN --------------------------------------------1----------------------- ---14----------------1--1-------11116422142212-1-1---21--1--521-132266-------------------------------------------------------------------------------------------------------------------------1-----------------1---------11-----------3----------------------1--------11----1------11-------------------------------------------------------------------------------------------------------------------------------------------1------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 266-267| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //