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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56991.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.32.1
:123 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   12->123 1xrkB PDBj 1e-04 33.3 %
:RPS:PDB   1->123 1bylA PDBj 6e-13 20.2 %
:RPS:SCOP  1->118 1r9cA  d.32.1.2 * 1e-13 15.2 %
:HMM:SCOP  1->123 1q0oA2 d.32.1.3 * 3.3e-24 36.0 %
:HMM:PFM   7->118 PF00903 * Glyoxalase 7.2e-16 27.5 109/128  
:BLT:SWISS 5->122 YETH_BACSU 3e-15 33.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56991.1 GT:GENE BAD56991.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2316462..2316833 GB:FROM 2316462 GB:TO 2316833 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56991.1 LENGTH 123 SQ:AASEQ MTTHISHISRAVLYVADQAASRAFYADQLGFDVLRDEEMFPGARWLELRPPGGTTALVLSAAAAFDKRPGEGAYLHFASTDIHATWEALRDKGVAVSEVRTAPWGRHLYATDPDGNEVLIAEQ GT:EXON 1|1-123:0| BL:SWS:NREP 1 BL:SWS:REP 5->122|YETH_BACSU|3e-15|33.9|118/120| BL:PDB:NREP 1 BL:PDB:REP 12->123|1xrkB|1e-04|33.3|105/121| RP:PDB:NREP 1 RP:PDB:REP 1->123|1bylA|6e-13|20.2|119/122| HM:PFM:NREP 1 HM:PFM:REP 7->118|PF00903|7.2e-16|27.5|109/128|Glyoxalase| RP:SCP:NREP 1 RP:SCP:REP 1->118|1r9cA|1e-13|15.2|112/125|d.32.1.2| HM:SCP:REP 1->123|1q0oA2|3.3e-24|36.0|114/0|d.32.1.3|1/1|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| OP:NHOMO 31 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- -11---------------------------------1-22-----111---1121--1---1------21---------------------------------------------------------------------------------------------------------------------------1--------1----1------1----------1-----11----------------------------------------------------------------------------------------------------------1------------------------------------1-----------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 100.0 SQ:SECSTR ccccccccEEEEEEEccHHHHHHHHHHTTccEEEEEcccEEEEEETTEEcEEEEEcccTTTGGGcEEEEEEccHHHHHHHHHTTcccccccccccEcccEEETTEEEEEEEcTTccEEEEEEc PSIPRED cccccEEEEEEEEEEccHHHHHHHHHHHHccEEEEEEEccccEEEEEEEcccccEEEEEccccccccccccccEEEEEEccHHHHHHHHHHcccEEcccEEcccEEEEEEEcccccEEEEEEc //