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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56999.1
DDBJ      :             putative thioesterase
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  143/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:137 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->135 1psuB PDBj 2e-22 46.7 %
:RPS:PDB   14->130 3dkzA PDBj 7e-17 21.1 %
:RPS:SCOP  20->117 1ixlA  d.38.1.5 * 8e-23 33.0 %
:HMM:SCOP  1->139 1q4tA_ d.38.1.5 * 2.9e-29 32.6 %
:HMM:PFM   51->126 PF03061 * 4HBT 4.5e-16 38.2 76/79  
:BLT:SWISS 4->135 PAAI_ECOLI 9e-28 45.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56999.1 GT:GENE BAD56999.1 GT:PRODUCT putative thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2325066..2325479) GB:FROM 2325066 GB:TO 2325479 GB:DIRECTION - GB:PRODUCT putative thioesterase GB:PROTEIN_ID BAD56999.1 LENGTH 137 SQ:AASEQ MTTVDESATAHARQMFADDLASRALGIEIAVLGPGHATATMTVSDRMVNGHGITHGGYVFLLADTTFALACNSHGRSAVAARADIRYLRPTRAGELLTATAVERAVFGRNGIYDVTVTDSTGRTVAEFRGDSRVIAN GT:EXON 1|1-137:0| BL:SWS:NREP 1 BL:SWS:REP 4->135|PAAI_ECOLI|9e-28|45.5|132/140| BL:PDB:NREP 1 BL:PDB:REP 10->135|1psuB|2e-22|46.7|120/132| RP:PDB:NREP 1 RP:PDB:REP 14->130|3dkzA|7e-17|21.1|114/121| HM:PFM:NREP 1 HM:PFM:REP 51->126|PF03061|4.5e-16|38.2|76/79|4HBT| RP:SCP:NREP 1 RP:SCP:REP 20->117|1ixlA|8e-23|33.0|94/130|d.38.1.5| HM:SCP:REP 1->139|1q4tA_|2.9e-29|32.6|138/0|d.38.1.5|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 159 OP:NHOMOORG 153 OP:PATTERN ------1-1---1-1---------1---------------------11-1-1---------------- ---11--1--1----------------------11111111------1----111221--1----1--1-----------1-------1111----------------------------------1-11------------------------------------------------------1-11-------------------------------------------1-----------------------------------------------------------------------------------------------------------------------1------1-1----11------1-------------1111--11111-----------------2------------1------2---111-----11--------1----1----------------------------------1--111111111111111111111111111111111--11111---1---11--1----------------111---1-----1---1------------1-1--1----------------------1--------------1------------------1--------------------1---1---11--111---1-1-----1--1111---------------------1--------------------------------------1---------------11111-----------11--11111---------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 134 STR:RPRED 97.8 SQ:SECSTR ##cccTTHHHHHHcccccccHHHHHTcEEEEEETTEEEEEEccccTTccccccccHHHHHHHHHHHHHHTTTTccTTccEEEEEEEEEccccccEEEEEEEEEEEEcccEEEEEEEEEETTccEEEEEEEEEEEcE# DISOP:02AL 1-2| PSIPRED cccHHHHHHHHHHHHHcccHHHHHcccEEEEEcccEEEEEEEEcHHHHccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEccccccEEEEEEEEEEEccEEEEEEEEEEEccccEEEEEEEEEEEEEc //