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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57001.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  636/915 : Eukaryota  180/199 : Viruses  0/175   --->[See Alignment]
c.82.1d.38.1
:681 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->477 2vroA PDBj e-108 45.3 %
:BLT:PDB   539->675 1q6wG PDBj 1e-10 36.8 %
:RPS:PDB   5->473 1bxsA PDBj 3e-44 23.8 %
:RPS:PDB   537->673 2c2iA PDBj 3e-17 22.8 %
:RPS:SCOP  5->459 1uzbA  c.82.1.1 * 3e-45 21.1 %
:RPS:SCOP  539->675 1q6wA  d.38.1.4 * 2e-30 34.8 %
:HMM:SCOP  1->504 1uzbA_ c.82.1.1 * 9.2e-74 29.8 %
:HMM:SCOP  529->678 2bi0A1 d.38.1.4 * 4.4e-34 37.6 %
:RPS:PFM   56->444 PF00171 * Aldedh 4e-12 32.7 %
:RPS:PFM   543->650 PF01575 * MaoC_dehydratas 3e-17 49.5 %
:HMM:PFM   21->456 PF00171 * Aldedh 2.2e-55 28.0 407/462  
:HMM:PFM   549->655 PF01575 * MaoC_dehydratas 4.4e-23 32.1 106/123  
:BLT:SWISS 5->679 MAOC_ECOLI e-169 50.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57001.1 GT:GENE BAD57001.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2325852..2327897) GB:FROM 2325852 GB:TO 2327897 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57001.1 LENGTH 681 SQ:AASEQ MSELLQSYVGGRWVTPPDEGTPLLSAVDGSVVARLSSTGVDRAHMVDHARTVGGPALAALTFHERAARLKALGKYLLEHKAELYAISAHTGATERDSAVDIDGGAGTLLSYASKATRELPNDTVYLDGGVERLGRKGTFAGQHIYTARRGVAVQINAFNFPVWGFLEKLAPAFIAGVPSLVKPAGQTAYLTEAAFRLIIESGLLPEGSVQLLCGSAGDLLDHLGGQDSVAFTGSAETAALLRAHPVVVREAVRFTAEADSLNASILGADVTPGSPEFELFVGQLVTEMTVKAGQKCTAIRRALVPEPMVDAVVDAVRERLARVVVGAPGADGVTMGALAGIDQREEVRKAVRALTKSAQIVFGDPESVTVVGADAATGAFLSPILLRCDDREAVEPHEVEAFGPVSTVLGYRDTADAIALAARGKGSLVASVVTGDTAVAREIALGLAPYHGRVLVLDTVDARESTGHGSPLPTLVHGGPGRAGGGEELGGIRGVLHHMQRTAVQGSPAVLTAVGRRWVTGADQVRGDVHPFRKDLGQLKLGDTIVAGPRRVTLDDIGHFAEFTGDTFYAHTDPEAAAANPLFGGIVAHGYLVVSLAAGLFVDPAPGPVLANFGVDNLRFLTPVKAEDELTVTLTAKQITPRTSAAYGEVRWDATVTNQNDEAVATYDVLTLVAKPEGETK GT:EXON 1|1-681:0| BL:SWS:NREP 1 BL:SWS:REP 5->679|MAOC_ECOLI|e-169|50.5|667/681| SEG 368->379|vtvvgadaatga| SEG 478->494|ggpgragggeelggirg| BL:PDB:NREP 2 BL:PDB:REP 1->477|2vroA|e-108|45.3|475/521| BL:PDB:REP 539->675|1q6wG|1e-10|36.8|133/147| RP:PDB:NREP 2 RP:PDB:REP 5->473|1bxsA|3e-44|23.8|442/494| RP:PDB:REP 537->673|2c2iA|3e-17|22.8|136/147| RP:PFM:NREP 2 RP:PFM:REP 56->444|PF00171|4e-12|32.7|361/440|Aldedh| RP:PFM:REP 543->650|PF01575|3e-17|49.5|107/116|MaoC_dehydratas| HM:PFM:NREP 2 HM:PFM:REP 21->456|PF00171|2.2e-55|28.0|407/462|Aldedh| HM:PFM:REP 549->655|PF01575|4.4e-23|32.1|106/123|MaoC_dehydratas| GO:PFM:NREP 5 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| GO:PFM GO:0008152|"GO:metabolic process"|PF01575|IPR002539| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01575|IPR002539| RP:SCP:NREP 2 RP:SCP:REP 5->459|1uzbA|3e-45|21.1|432/516|c.82.1.1| RP:SCP:REP 539->675|1q6wA|2e-30|34.8|135/151|d.38.1.4| HM:SCP:REP 1->504|1uzbA_|9.2e-74|29.8|470/516|c.82.1.1|1/1|ALDH-like| HM:SCP:REP 529->678|2bi0A1|4.4e-34|37.6|149/0|d.38.1.4|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 4141 OP:NHOMOORG 864 OP:PATTERN 111-1-3433333432-3-11--351111-211-1--11111111122-1132--1--1--223---1 454486254474249D922-2E--9L222226CGMIBKab3A1D2232-113D56923--24B-27AA885--------11-911111---1-1-----2-1-1131412---------------------1-1--23345---34123122113-----1--21-22222------------33622-1-5736666657666565559855276685EB89641--1--733444444444444446556611--22-111111--11---121---111-----11---------------------------111-----1-15111211211--1---1112--2-3-------1-------------4-276632--116557C2126745399A999A7A9A-22722B35EB7-DBB9CBGDCJIF7655479G866739A444444443551133311111111----1111-1111-11-----35GI5234538IDDDEG76665FFJKAA8758MDU9KG91-7766535385A8CE1-1-112541233333-12433-32-122-11-22---1-211123----46-42111211--1----------1-1--2141-351936453344463424333554466---4411------35444536443633367-4757433736435666665BAA774525655545555445455A44-3334-1123243323445--141111166651249H2221-1-----1--2CBB7C47466A-AB8BABBG8EGED7AAB2111121111322523333566361144443112------1-22--1----------------1---1---------1---1111-------1-3-- ----135-42--251665681245B8733343464446453454443137B9KC684344422-446632343213222232212212-3326-2-3231123512-343E7H6AA91123691B7-5-Ba8-7A6221-B34742223261193977A5CD6C8425123138323--M2222456DB77D127688- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 656 STR:RPRED 96.3 SQ:SECSTR cEEcccEEETTEEEccTTccEEEEcTTTccEEEEEEcHHHHHHHHHHHHHTcTTcHHHHccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTccHHHHHHTHHHHHHHHHHHHHHHGGGccccEEcccccEEEcccTTEEEEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHTTcEEEEEccTTccHHHHHHHHHHHHHTcccTTcEEEcccTHHHHHHTcTTccEEEEEccHHHHHHHHHHHHHHTTccEEEEEcccccEEEEcTTcEcTTccHHHHHHHHHHHHHTTTTccTTcccEEEEEHHHHHHHHHHHHHHHTccccccTTcTTccccccccHHHHHHHHHHHHHHHTTcEEccccccccccccEEcccccEEccEEEEcccTTcHHHHcccccccEEEEEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccccEEEEcccccccTTccccccGGGEEc###################HHHHHHTcTTTEEEEEEE#####cccTTHTTcccccccccHHHTTTcEEEcccEEccHHHHHHHHHHHccccHHHHcHHHHHHTcTTccccccHHHHHTHHHHHHTcEEccccEEEEEEEEEEccccccTTcEEEEEEEEEEEEEEETEEEEEEEEEEEETTcccccEEEEEEEEEcccTTcTE# DISOP:02AL 677-681| PSIPRED cHHHHHHHHccEEEcccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccEEEEEEcccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHccccccEEEEcccHHHHHHHHHHHHcccccEEEEEEEcccccEEEEcccccccHHHHHHHHHHHHHHHHccccEEEcccEEEEEccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccEEEEcccccccccccccccccEEccEEEEcccccccEEEEEcccccEEEEEEcccHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHcEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHcEEEEEccccccccccEEcccccccccccccccccHHHccccccccccccEEcHHHHHHHHHHcccEEEEEccHHHHHHccccccHHHHHHHHHHHHHccEEccccccEEEEccccccEEEEccccccEEEEEEEEEEEccccccccEEEEEEEEEEcccccEEEEEEHHHHEEccccccc //