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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57007.1
DDBJ      :             putative phenylacetic acid degradation protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  135/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.25.1
:314 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->221 3dhgA PDBj 9e-25 13.8 %
:RPS:SCOP  35->268 1otkA  a.25.1.2 * 8e-72 17.2 %
:HMM:SCOP  32->276 1otkA_ a.25.1.2 * 2e-80 38.5 %
:RPS:PFM   27->262 PF05138 * PaaA_PaaC 3e-62 57.3 %
:HMM:PFM   22->296 PF05138 * PaaA_PaaC 2.2e-106 42.1 254/263  
:BLT:SWISS 9->298 PAAA_ECOLI e-124 67.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57007.1 GT:GENE BAD57007.1 GT:PRODUCT putative phenylacetic acid degradation protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2332401..2333345 GB:FROM 2332401 GB:TO 2333345 GB:DIRECTION + GB:PRODUCT putative phenylacetic acid degradation protein GB:PROTEIN_ID BAD57007.1 LENGTH 314 SQ:AASEQ MTTSTADLERDFEEILARDQRIEPRDWMPEGYRKTLIRQIAQHAHSEIIGMQPEGNWITRAPSLRRKAILMAKVQDEAGHGLYLYSAAETLGADRADLTDKLIEGRQKYSSIFNYPTLTYADVGVIGWLVDGAAICNQVPLCRSSFGPYARAMIRVCKEESFHQRQGYELLLTMMSGTAAQRAMVQDAVDRWWWPSLMMFGPPDDQSPNTAQSMAWRIKRHTNDELRQRFVDMTVPQAEVLGVRLPDPELRWNAERGHYDFGTPDWDEFAAVVAGQGACNVERIANRRSAHENGAWVRAAAAAFAARERKGTHR GT:EXON 1|1-314:0| BL:SWS:NREP 1 BL:SWS:REP 9->298|PAAA_ECOLI|e-124|67.9|290/100| SEG 299->306|aaaaafaa| RP:PDB:NREP 1 RP:PDB:REP 1->221|3dhgA|9e-25|13.8|218/491| RP:PFM:NREP 1 RP:PFM:REP 27->262|PF05138|3e-62|57.3|232/260|PaaA_PaaC| HM:PFM:NREP 1 HM:PFM:REP 22->296|PF05138|2.2e-106|42.1|254/263|PaaA_PaaC| RP:SCP:NREP 1 RP:SCP:REP 35->268|1otkA|8e-72|17.2|227/244|a.25.1.2| HM:SCP:REP 32->276|1otkA_|2e-80|38.5|239/0|a.25.1.2|1/1|Ferritin-like| OP:NHOMO 159 OP:NHOMOORG 144 OP:PATTERN -------11--1112---------1------------------------------------------- ----1--1--1---1---------------------11211------1----111111--111-111111------------1----------------1-----1-----------------------------------------------------------------------------11111---1------------------1--------22--1-------1-----------------------------------------------------------------------------------------------------------------------1---------------------1-------------1111--11111-----------------2------------1---11-1---111-----11--------1---------------------------------------1--111112111112122211111111111113221--11111---1---11-------------------211---------------------------------------------------------------------1------------------1--------------------1---1---11--111---1-1-----1--1111---------------------1--------------------------------------1---------------11111-----------11---1111----------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 255 STR:RPRED 81.2 SQ:SECSTR HHHHHHHHHHHHHHHHHHTGGGcHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTcGGGcTTGHHHHGGGcccHHHHHHHHHHHHTTcccHHHHHHHcccccccTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTccGGGccccHHHHHHHHTTTTccccccTTT######ccccHHHHHHTccccc##################################################### DISOP:02AL 1-3, 5-7, 305-314| PSIPRED cccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccc //