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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57012.1
DDBJ      :             putative phenylacetate-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  245/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:436 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   212->357 1t5dX PDBj 4e-08 34.8 %
:BLT:PDB   335->430 3gxsA PDBj 2e-08 34.7 %
:RPS:PDB   30->429 3dlpX PDBj 2e-32 16.9 %
:RPS:SCOP  30->429 1t5dX  e.23.1.1 * 3e-31 16.4 %
:HMM:SCOP  9->404 1t5hX_ e.23.1.1 * 5.6e-62 29.8 %
:RPS:PFM   12->105 PF04443 * LuxE 1e-10 39.3 %
:RPS:PFM   88->360 PF00501 * AMP-binding 5e-09 32.8 %
:HMM:PFM   88->357 PF00501 * AMP-binding 1.6e-29 27.6 257/418  
:HMM:PFM   20->110 PF04443 * LuxE 8.5e-05 20.2 84/366  
:BLT:SWISS 14->434 PAAK_ECOLI e-160 65.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57012.1 GT:GENE BAD57012.1 GT:PRODUCT putative phenylacetate-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2336202..2337512 GB:FROM 2336202 GB:TO 2337512 GB:DIRECTION + GB:PRODUCT putative phenylacetate-CoA synthetase GB:PROTEIN_ID BAD57012.1 LENGTH 436 SQ:AASEQ MSSVAPASPQTLGDRIEFASRDEISALQLDRLKWSLAHAYANVPHYRAAFDAAGVHPSDLTDLADLAKFPFTTKQDLRANYPFGMFAVPQEQVSRIHASSGTTGQPTVVGYTAGDLDNWADLIARSLRAGGVRPGDKVHIAYGYGLFTGGLGAHYGAERLGCTVIPMSGGMTQRQVQLITDFRPDAIMVTPSYMLTILDEMITAGVDPAATSLRVGVFGAEPWTETMRVELEQQLGIDAVDIYGLSEVIGPGVAMECAETKDGLHIWEDHFYPEIIDPETGAVLPDGEEGELVFTSLTKEAMPVIRYRTRDLTRLLPGTARSMRRMQKITGRSDDMIILRGVNLFPTQIEELILTVPVLAPQFQCVLDRPARMDVLTVRVETRPGVTGEQMAAAARDLRHVVKNRIGVSVEVEVLPTGALERSIGKARRLIDNRPR GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 14->434|PAAK_ECOLI|e-160|65.1|421/437| BL:PDB:NREP 2 BL:PDB:REP 212->357|1t5dX|4e-08|34.8|135/502| BL:PDB:REP 335->430|3gxsA|2e-08|34.7|95/104| RP:PDB:NREP 1 RP:PDB:REP 30->429|3dlpX|2e-32|16.9|397/504| RP:PFM:NREP 2 RP:PFM:REP 12->105|PF04443|1e-10|39.3|84/345|LuxE| RP:PFM:REP 88->360|PF00501|5e-09|32.8|253/405|AMP-binding| HM:PFM:NREP 2 HM:PFM:REP 88->357|PF00501|1.6e-29|27.6|257/418|AMP-binding| HM:PFM:REP 20->110|PF04443|8.5e-05|20.2|84/366|LuxE| GO:PFM:NREP 4 GO:PFM GO:0008218|"GO:bioluminescence"|PF04443|IPR007534| GO:PFM GO:0047474|"GO:long-chain fatty acid luciferin component ligase activity"|PF04443|IPR007534| GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 30->429|1t5dX|3e-31|16.4|396/502|e.23.1.1| HM:SCP:REP 9->404|1t5hX_|5.6e-62|29.8|382/503|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 578 OP:NHOMOORG 281 OP:PATTERN ---1--2222222122-------42-------223---333334527334544--------------- ----2--1--1---1---------------------1121-1-1--------111111----1-112112---------2433-----2223-2------1111-111------------------1-11--11--11111222-1-------------------------------------211221--1------------------1--------11--1-------2-------------------------------------------------------------------------------------------3------------1-4-------2-2-12--52213241--23---3----31-----------2331--34425--------------21-4------------2-----14-1-2221122122--------1----3-3--------------------------------1--243332222221111122111111122223332--11123111311222--2----21-------111434-454468557555513432553443223-117---------------------21----------1-1-1------1-----1--1-13---111--------------1---1---11--111---1-1-----1--1111---------------------1--------------------------------------1---------------11121-----------311--1111------------------------1----------------------------------------------------------------1---------1- -------------------1----------------------------------------------------------------------------------------1------1------------------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 410 STR:RPRED 94.0 SQ:SECSTR ##########################ccHHHHHHHHHHTTccEEEEcccHHHHHHHHTcccccEEEEHHHHEETTEEccccccccccccTTcEEEEEEEcccccccEEEEEEGGGHHHHHHHHHHTTTcccccTTcEEEEcccTTcHHHHTTTHHHHHHTTcEEEEcccccHHHHHHHHHHTTccEEEccHHHHHHHHHHHHHccTTcccTTccEEEEccTTccHHHHHHHHHHcccEEEEEEEETTTEEEEEEEccccTTEEcccTTccEEEEcTTccTTccccccccEEEEEEccTTcccccTTcHHHHHHHEETTEEEEEEEcEEEEEETTTcEEETTEEEcHHHHHHHHTTcTTEEEEEEEEEEcccccEEEEEEEEEcTTccccHHHHHHHHHHcccccGGGcccEEEEcccccccccTccccTEEEEEEE DISOP:02AL 1-3| PSIPRED ccccccccHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHcccccHHHHHccccccccccccccEEEEEEcccccccccEEEEcHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHcccEEEEEcccHHHHcccccccccccccccccccccEEEEEEEcccccccccccEEEEEEEcccHHHHccccEEEcEEEEEccccccccccEEEEEccEEEEEEEccEEEcHHHHHHHHHHcccEEEEEEEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHccc //