[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57017.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:455 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   142->234 PF07681 * DoxX 3.8e-05 26.2 80/85  
:HMM:PFM   13->57 PF12122 * DUF3582 0.00015 26.7 45/126  
:BLT:SWISS 146->247 YWOB_BACSU 1e-05 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57017.1 GT:GENE BAD57017.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2340961..2342328) GB:FROM 2340961 GB:TO 2342328 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57017.1 LENGTH 455 SQ:AASEQ MSTVDAATRSDRQAAEPPAGQTVPVRWNPLTRIVFRFCFVYFGLFCLLFAQIVFAFLGYVVTLLPDDAMLWQMRTIAPVVEWLGRTVFDTEVVLRTDSGSGDQAFIWTLVFGILVVSVLATLVWTVLDRRRTEYRVLAGWFLIFLRLCLAGQMLFYGVAKLIPSQMPEPALQALLQPFGEFSLTSVLWLQVGSSPAYEILLGAAEVLGGVLLFLPRTALLGALLSLVAMAQVWVLNMTFDVPVKILSFHLLLLAVVLLAPEARRLLDALVLDRPTGPSTYPQPFRTPRSRRIAATAQAALGVWMTAGLLYMGVDSWYEFGGGKAKPELYGIWEVTEFTVDGTPAPPLTTDENRWQRLVVEHEEMVTLQRMDGTLVPTLATTADNALTLTAPPTAPDATPTTLGTFTLDRPTPDQLRLDGQWNGHPVTIALTQRDLNEFPLRQREFHWIQDYPNFR GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 146->247|YWOB_BACSU|1e-05|29.3|99/100| TM:NTM 7 TM:REGION 35->57| TM:REGION 105->127| TM:REGION 139->161| TM:REGION 181->203| TM:REGION 211->233| TM:REGION 241->262| TM:REGION 293->315| SEG 200->214|llgaaevlggvllfl| SEG 250->273|llllavvllapearrlldalvldr| SEG 376->402|ptlattadnaltltapptapdatpttl| HM:PFM:NREP 2 HM:PFM:REP 142->234|PF07681|3.8e-05|26.2|80/85|DoxX| HM:PFM:REP 13->57|PF12122|0.00015|26.7|45/126|DUF3582| OP:NHOMO 18 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------3----------1----------2---------1-----------------------------------------------------------81-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-22| PSIPRED ccccccHHcccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEccEEccccccccccEEEEEEEcccEEEEEEEccEEEccccccccccEEEEEccccccccccccEEEEEccccccEEEEEEEEccEEEEEEEEEEcHHHcccccccccEEccccccc //