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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57019.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  98/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->182 2zo4A PDBj 1e-10 38.4 %
:RPS:PDB   8->186 3dh8A PDBj 9e-16 20.9 %
:RPS:SCOP  6->190 1jt1A  d.157.1.1 * 6e-25 19.3 %
:HMM:SCOP  1->232 1k07A_ d.157.1.1 * 3e-41 31.5 %
:RPS:PFM   19->181 PF00753 * Lactamase_B 4e-06 32.3 %
:HMM:PFM   18->226 PF00753 * Lactamase_B 3.4e-32 26.3 186/194  
:BLT:SWISS 7->185 YFLN_BACSU 2e-14 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57019.1 GT:GENE BAD57019.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2343369..2344112) GB:FROM 2343369 GB:TO 2344112 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57019.1 LENGTH 247 SQ:AASEQ MLTPNVADGVHLLAHAAVNVYLVEDEDGVTLVDTGLPATYPRIRRALRAIGRDTRDVRAVVLTHAHFDHVGSARRIHRDWQLPIRTHTAERFLAAHPYRYRHERARLRYPLRYPKSVLVLARMAAAGALFVRGTPEVTCFDDGAELDVPGRPRVVFTPGHTLGHCALHLPGRDTVLSGDALVTLDPYTGATGPQIVSGAATADSTQALSSLTALAATGARTVLPGHGAPWFDGVAAAAELALRAGPS GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 7->185|YFLN_BACSU|2e-14|33.3|165/264| SEG 199->221|aatadstqalssltalaatgart| SEG 235->244|aaaaelalra| BL:PDB:NREP 1 BL:PDB:REP 18->182|2zo4A|1e-10|38.4|146/301| RP:PDB:NREP 1 RP:PDB:REP 8->186|3dh8A|9e-16|20.9|172/299| RP:PFM:NREP 1 RP:PFM:REP 19->181|PF00753|4e-06|32.3|133/171|Lactamase_B| HM:PFM:NREP 1 HM:PFM:REP 18->226|PF00753|3.4e-32|26.3|186/194|Lactamase_B| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00753|IPR001279| RP:SCP:NREP 1 RP:SCP:REP 6->190|1jt1A|6e-25|19.3|166/262|d.157.1.1| HM:SCP:REP 1->232|1k07A_|3e-41|31.5|213/262|d.157.1.1|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 139 OP:NHOMOORG 110 OP:PATTERN ------1-------11-----------1---3-----------11--1------1-----1------- --1-1--1------11111-11111111111111111141-21------12-11-1-----1--121-1------------11----------------------1-1----------------------------122--------------------------------------------1-2-------322222--2-3-21---111-232--------------31---------------------------------------------------------------------------------------------1-1111111-1----------1--------11------1-----------------------1-----------------------1--11-1---------1-1-1------------1--------------------------------------------------------------1---------1-----------------------------------------------------------------------11---11-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------2- -----------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 227 STR:RPRED 91.9 SQ:SECSTR EEEccEETTEEEEccTTccEEEEEETTEEEEEccccGGGHHHHHHHHHHHcccGGGEEEEEcccccTTTTTTHHHHGGGcTcEEEEEHHHHHHHTcHHHHHHHHHHHHTTccccccccccccGGGccEEEEcTTcEEEEETTcccEEccEEEEEEEcccccTTcEEEEEGGGTEEEEETTTcEEETTTcccccc###cccHHHHHHHHHHHHHHHHHHccEEEEcccHHH################# DISOP:02AL 1-2, 245-247| PSIPRED cccccccccEEEEEccEEEEEEEEEccEEEEEEccccccHHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccEEEEEcccEEEcccEEEEEEccccccccEEEEEccccEEEEcHHEEcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHcccc //