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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57021.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->133 3g7rB PDBj 3e-06 23.2 %
:RPS:PDB   21->176 3br6A PDBj 5e-13 14.1 %
:RPS:SCOP  21->91 2fbqA1  a.4.1.9 * 6e-10 15.5 %
:HMM:SCOP  18->89 2g3bA1 a.4.1.9 * 5.7e-12 31.9 %
:HMM:PFM   32->70 PF00440 * TetR_N 2.3e-13 33.3 39/47  
:BLT:SWISS 21->133 ACNR_CORDI 3e-06 27.4 %
:BLT:SWISS 118->176 DXS_SHEFN 2e-04 37.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57021.1 GT:GENE BAD57021.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2346119..2346736) GB:FROM 2346119 GB:TO 2346736 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57021.1 LENGTH 205 SQ:AASEQ MTRTDSATGAAVQAAAESGFRRRLLDGMAAAVRERGYRDATVADVVRHARTSRRTFYEHFAGKQDCFIALLTERNATVIEQIAAAVDTEAPWRVQIRQAVEAWIGASQIDPTITLAWIRETPALGESAQRLHRETANAFIALIQSLTGSAGFAAAGLRPPSRRLATILYGGFRELIATTVEDGGDIDDIVDVAVAAAVALLGPPD GT:EXON 1|1-205:0| BL:SWS:NREP 2 BL:SWS:REP 21->133|ACNR_CORDI|3e-06|27.4|113/190| BL:SWS:REP 118->176|DXS_SHEFN|2e-04|37.3|59/621| SEG 180->199|vedggdiddivdvavaaava| BL:PDB:NREP 1 BL:PDB:REP 7->133|3g7rB|3e-06|23.2|125/199| RP:PDB:NREP 1 RP:PDB:REP 21->176|3br6A|5e-13|14.1|156/185| HM:PFM:NREP 1 HM:PFM:REP 32->70|PF00440|2.3e-13|33.3|39/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 21->91|2fbqA1|6e-10|15.5|71/79|a.4.1.9| HM:SCP:REP 18->89|2g3bA1|5.7e-12|31.9|72/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 33 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ----1----------1111-13--2111111232221---------------------------1-------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 172 STR:RPRED 83.9 SQ:SECSTR ######HHHHHHHcccHHHHHHHHHHHHHHHHHHHcTTTccHHHHHHHTTccHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHcc########################### DISOP:02AL 1-22| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccc //