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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57030.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:480 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  24->444 1pv7A_ f.38.1.2 * 1.4e-26 21.6 %
:RPS:PFM   278->392 PF05977 * DUF894 5e-05 29.6 %
:HMM:PFM   34->380 PF07690 * MFS_1 5.8e-23 19.4 330/353  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57030.1 GT:GENE BAD57030.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2353039..2354481 GB:FROM 2353039 GB:TO 2354481 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57030.1 LENGTH 480 SQ:AASEQ MSMRITRGSTEDTARLDFRDPTVRTFAHLLVNVLLVTFINFTVWFAITFFVYLRTRSVFATGVIAGIFLVATAATGVWFGSLVDHHRKKTVMQVSALVSLTIYTLALACYLVTPADEWRDPGSAWLWLFIVLLMTGVISGNVRGIALPTIVTALFDERVRDRANGLVGTATGVSHLVTSVASALLVGWNGMLGVLVLAVAVLAGSVLHLHRLRLPETLAHAAAGEPRRVDLRGTVRVIRGIPGMVPLIAFTSLNNLLMGGLMALLDPYALSMMSVQAWGVIWGALSGVMIVGGLLVARLGTSSNPVRLILLANMGLWVVTLAFPLRDSALLLVAGMAVFMLVMPFVEAAEQTVLQKVVPYERQGRVFGFAQSVEQAAAPLTAFLISPLTQFVVIPLMTDGAGARTIGGWFGTGEARGMGLVFVLLGLLGLLFTGYALGSKHYRRLSRSYRGEAAACACVELPRERGDDHLECPQHTPVAA GT:EXON 1|1-480:0| TM:NTM 11 TM:REGION 27->49| TM:REGION 60->82| TM:REGION 92->114| TM:REGION 129->151| TM:REGION 165->187| TM:REGION 190->211| TM:REGION 255->277| TM:REGION 286->308| TM:REGION 327->349| TM:REGION 378->400| TM:REGION 416->438| SEG 192->210|lgvlvlavavlagsvlhlh| SEG 253->265|lnnllmgglmall| SEG 417->438|gmglvfvllgllgllftgyalg| RP:PFM:NREP 1 RP:PFM:REP 278->392|PF05977|5e-05|29.6|115/402|DUF894| HM:PFM:NREP 1 HM:PFM:REP 34->380|PF07690|5.8e-23|19.4|330/353|MFS_1| HM:SCP:REP 24->444|1pv7A_|1.4e-26|21.6|385/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 16 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- -------1111-------------------------1-------11------1------------------------------------------------------1--------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-12, 215-229, 478-480| PSIPRED cccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcHHHcccccccccccccccc //