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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57046.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  763/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:279 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->241 2rhrB PDBj 8e-20 35.9 %
:RPS:PDB   67->213 3ce6B PDBj 4e-27 9.6 %
:RPS:SCOP  66->269 1a27A  c.2.1.2 * 3e-23 23.5 %
:HMM:SCOP  5->254 1zbqA1 c.2.1.2 * 5.3e-61 38.2 %
:RPS:PFM   66->169 PF00106 * adh_short 2e-10 48.0 %
:HMM:PFM   14->176 PF00106 * adh_short 9.8e-32 32.9 158/167  
:BLT:SWISS 87->253 YQJQ_BACSU 6e-23 34.1 %
:PROS 145->173|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57046.1 GT:GENE BAD57046.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2372789..2373628) GB:FROM 2372789 GB:TO 2373628 GB:DIRECTION - GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID BAD57046.1 LENGTH 279 SQ:AASEQ MSRYPAIDVRGALVAVTGAGRGIGAATARAFVEAGAHVALGDLDADAAAATAAGLGPLAGAHPLDVTDKWSFAAFLAHAESRHGRPLDILVNNAGVMPNGPFLDQDEDLDRLTMEVNVFGLVHGMRLALPGMVERGRGHIVNVCSLAGKFPLAGLAMYNASKYAAVGLTAATRLEHADTGVSITAVLPSAVRTELSAGIDYGVLPAVDPEDVAAAIVGTVASRAAEVAVPGYLGPAADAATLVPERVMRVLRRLAGDDAAITRVDTAIRGAYVERIRRR GT:EXON 1|1-279:0| BL:SWS:NREP 1 BL:SWS:REP 87->253|YQJQ_BACSU|6e-23|34.1|167/259| PROS 145->173|PS00061|ADH_SHORT|PDOC00060| SEG 14->30|vavtgagrgigaatara| SEG 34->65|agahvalgdldadaaaataaglgplagahpld| BL:PDB:NREP 1 BL:PDB:REP 74->241|2rhrB|8e-20|35.9|167/256| RP:PDB:NREP 1 RP:PDB:REP 67->213|3ce6B|4e-27|9.6|146/485| RP:PFM:NREP 1 RP:PFM:REP 66->169|PF00106|2e-10|48.0|102/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 14->176|PF00106|9.8e-32|32.9|158/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 66->269|1a27A|3e-23|23.5|204/285|c.2.1.2| HM:SCP:REP 5->254|1zbqA1|5.3e-61|38.2|249/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 6886 OP:NHOMOORG 980 OP:PATTERN --11--3432323222-3--1---63321324-1---------1--23--421-----1---222-32 78E1N313449564RbTGG-GM44ToGGGGGOZaZaPXnd3I7cE8552732D9671C--78I2C8OKJE7-222---1252G-11--2342-222---43C169T6H48--------------1411493232639BB8A11-75E77A4335522-12233233789I41-11111--11197466121749333344648564565846648454488A9665444537L122222212222222333154-413413---7A334552317443354526653222222222222245445545555553331113333123262222222-2-4233115313--1351-13211111312111-312915I888-----E4QFH225BBA9B7879788789B-DEEB9NBHEMD-RDDDMHOSRMSQBM898DDHHBDEAAF4444444479A54AA5--------------21-----1--1----14OR446GCCESTUVVSEEEFDNNMNFGGF7FeJVIbRK23CDE86A77DAHBLG5A7-2254422222221-59835J4811121-133215551632536975KI-3--------------------112-3446344426351211122-8332133253314--12343------366B3944553444444-5344434544534554554797532135334454444444445C33322241-1333333333331-142222233343C887111211-11111---776884814793DE9C6AEEEA9FDAA9912222222212226333333321146877763333-1---23554466--------1-3------1-2--------2-------122111112117- ----B47-212-2549A6BC9CAGGGC5636453656766556423DA9FAEKD9B846213324132-4--334--1--22233121-2C6A5C43323225944-5B9fOQHKOC7586AC4HI6K5OrF-HEJ9895G6AI97B833C35E8IEIMHMC8M9B6BFTQ68HG274171-17B88AH9B736D7994 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 214 STR:RPRED 76.7 SQ:SECSTR #################################################################cEEcccccccccHHHHHHcccTTcEEEEccccGGGccHHHHHHTTcEEEEEETTEEEEEcTTTccEEEEEGGGccHHHHHcccccHHHHHHcGGGccccEEEccHHHHHHHHHHHHHHHTcccccccHHHHHHHTccTTcccccTTccHHHHHHHHTTccEEEEccHcccHHHHHHHHccTTHHHHHTTTccTTcHHHHHHHHHHcHHHHTTcc DISOP:02AL 1-4, 277-279| PSIPRED ccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHcccHHHHHcccHHHHHHHHHHHccccccEEEcHHHHHHHHHHHcccHHHHHHHHHHHHccccccEEEEEEEcccEEcccccc //