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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57049.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:212 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->66 2eh3A PDBj 9e-10 42.6 %
:RPS:PDB   13->199 3br2E PDBj 1e-14 13.4 %
:RPS:SCOP  11->67 2fd5A1  a.4.1.9 * 8e-12 29.8 %
:HMM:SCOP  1->89 1t33A1 a.4.1.9 * 1.5e-16 42.0 %
:HMM:SCOP  82->199 2gfnA2 a.121.1.1 * 4.3e-07 25.4 %
:HMM:PFM   17->63 PF00440 * TetR_N 1.1e-14 42.6 47/47  
:BLT:SWISS 1->64 TTGW_PSEPU 2e-08 44.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57049.1 GT:GENE BAD57049.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2376118..2376756 GB:FROM 2376118 GB:TO 2376756 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57049.1 LENGTH 212 SQ:AASEQ MTRLTRKEAHARTRERLVETAEEMFLANGYTVTSLDKVAARAGFSKGAVYSNFATKHELGLAVLERIRLARVLSLAAAVLGADTLDARIAAFGRWAEENIGDVGWLTVEVEFAIGTRHLDDLREELAVRRREITDTLAELIDQQAREFGVTLAVPAHDAAVRLLSLGIGLGVQRAFDPEVPVTPIVDALRELLTGAATRPAGLSVAPDAAKP GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 1->64|TTGW_PSEPU|2e-08|44.4|63/134| SEG 68->80|rlarvlslaaavl| BL:PDB:NREP 1 BL:PDB:REP 13->66|2eh3A|9e-10|42.6|54/170| RP:PDB:NREP 1 RP:PDB:REP 13->199|3br2E|1e-14|13.4|186/187| HM:PFM:NREP 1 HM:PFM:REP 17->63|PF00440|1.1e-14|42.6|47/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 11->67|2fd5A1|8e-12|29.8|57/76|a.4.1.9| HM:SCP:REP 1->89|1t33A1|1.5e-16|42.0|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 82->199|2gfnA2|4.3e-07|25.4|118/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 56 OP:NHOMOORG 42 OP:PATTERN -------------------------------------------------------------------- --------------2------2---1------23332222--1---1-------------------1---------------1-----------------------------------------------------------------------------------------------------------------------1----------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------1111------------------------------2----------------------------------------------------------------------------1--1--11---11-11111111-----------1--------1-------1----------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 209 STR:RPRED 98.6 SQ:SECSTR #cccccccHGTTHHHHHHHHHHHHHHHHcTTTccHHHHHHHTTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHccccGGGHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHTcccHHHHHHcccHH## DISOP:02AL 1-16, 208-212| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccc //