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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57052.1
DDBJ      :             putative fatty acid desaturase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:337 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   183->272 PF00487 * FA_desaturase 2e-06 36.5 %
:HMM:PFM   59->290 PF00487 * FA_desaturase 6.8e-39 23.8 231/257  
:HMM:PFM   15->84 PF07695 * 7TMR-DISM_7TM 0.00059 23.1 65/205  
:BLT:SWISS 33->322 DEGS1_XENTR 1e-08 28.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57052.1 GT:GENE BAD57052.1 GT:PRODUCT putative fatty acid desaturase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2379546..2380559 GB:FROM 2379546 GB:TO 2380559 GB:DIRECTION + GB:PRODUCT putative fatty acid desaturase GB:PROTEIN_ID BAD57052.1 LENGTH 337 SQ:AASEQ MSTVTPRPSPRSSSPSAPIPFSRRVFKLEHPANLGPLLHVVAWVGLLAFGLFAPIATTWYVAVPLIVTLTLLNFSLTIGVLHMHTHRPLFVSKRLNRVVDLFCCMPALLTAAEMREVHILNHHRYNDGPGDVTSTEGRERGLGAIWYWIRYGTIVKRHTIRTIFAADATAKQRIRRRQFVFDLTIVLALVALTWYAAGGARFALFYWIPFAVTQVNSGYFAWLTHAPARGFEDDPSKSLNTAGNWLNFFIFNQGYHSVHHRYPGIHWSQIPDKLDFMRQVEPGVIVPYWMTLNSAWRLVVPDGFLDVPYGQRWKAKLDKRMEEGRVRSRLLPWFAWI GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 33->322|DEGS1_XENTR|1e-08|28.4|264/323| TM:NTM 3 TM:REGION 33->55| TM:REGION 61->83| TM:REGION 185->207| SEG 6->24|prpsprssspsapipfsrr| RP:PFM:NREP 1 RP:PFM:REP 183->272|PF00487|2e-06|36.5|85/251|FA_desaturase| HM:PFM:NREP 2 HM:PFM:REP 59->290|PF00487|6.8e-39|23.8|231/257|FA_desaturase| HM:PFM:REP 15->84|PF07695|0.00059|23.1|65/205|7TMR-DISM_7TM| GO:PFM:NREP 3 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF00487|IPR005804| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00487|IPR005804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00487|IPR005804| OP:NHOMO 6 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------11-1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-19| PSIPRED ccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccEEccccccccccccccccHHHHHHHHHccEEEEEEEcHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEHHHHHHHHHcccccHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc //