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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57054.1
DDBJ      :             putative mevalonate kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.58.26
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   134->174 2oi2A PDBj 5e-04 43.9 %
:RPS:PDB   21->174 2a2cA PDBj 8e-07 13.0 %
:RPS:SCOP  22->174 1pieA1  d.14.1.5 * 6e-10 13.1 %
:HMM:SCOP  15->202 1k47A1 d.14.1.5 * 1.9e-34 31.1 %
:HMM:SCOP  184->324 1kvkA2 d.58.26.3 * 2.7e-26 38.6 %
:HMM:PFM   103->166 PF00288 * GHMP_kinases_N 4.8e-20 43.8 64/68  
:HMM:PFM   234->313 PF08544 * GHMP_kinases_C 1.6e-14 36.7 79/82  
:BLT:SWISS 23->175 KIME_AERPE 1e-06 27.6 %
:PROS 130->146|PS00283|SOYBEAN_KUNITZ
:PROS 110->121|PS00627|GHMP_KINASES_ATP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57054.1 GT:GENE BAD57054.1 GT:PRODUCT putative mevalonate kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2381413..2382396 GB:FROM 2381413 GB:TO 2382396 GB:DIRECTION + GB:PRODUCT putative mevalonate kinase GB:PROTEIN_ID BAD57054.1 LENGTH 327 SQ:AASEQ MTGPREPGAGAPGEVGAGRAHAKAILLGEHTVVHGTPALAVPIPALPVRASAFRAQHRPPGPGQPDARLSRLTVGARTPAVCGPQVAVGAALHRWDLDHETVDIVLHRTIPPARGLGSSAADAAAAVRAVADLYGRSLDADTLYELVQCGEQVAHGRASGVDARAILATGPIRFQAGAAEPLAVALDAALVLADSGVPGATQQAVAVAGKTLNGDTIGARRMLGRATELAATAMAALSEGRGAALGRTLLAFHELLGALGVGHPRTDALVAAALGAGAHGAKLTGAGLGGCVLALTEPGRAAATVGAALRRAGAVRTWTVPIRRTWS GT:EXON 1|1-327:0| BL:SWS:NREP 1 BL:SWS:REP 23->175|KIME_AERPE|1e-06|27.6|145/100| PROS 130->146|PS00283|SOYBEAN_KUNITZ|PDOC00255| PROS 110->121|PS00627|GHMP_KINASES_ATP|PDOC00545| SEG 3->20|gprepgagapgevgagra| SEG 37->50|palavpipalpvra| SEG 113->133|arglgssaadaaaavravadl| SEG 176->194|agaaeplavaldaalvlad| SEG 226->237|atelaatamaal| SEG 268->290|alvaaalgagahgakltgaglgg| SEG 299->317|graaatvgaalrragavrt| BL:PDB:NREP 1 BL:PDB:REP 134->174|2oi2A|5e-04|43.9|41/285| RP:PDB:NREP 1 RP:PDB:REP 21->174|2a2cA|8e-07|13.0|154/446| HM:PFM:NREP 2 HM:PFM:REP 103->166|PF00288|4.8e-20|43.8|64/68|GHMP_kinases_N| HM:PFM:REP 234->313|PF08544|1.6e-14|36.7|79/82|GHMP_kinases_C| RP:SCP:NREP 1 RP:SCP:REP 22->174|1pieA1|6e-10|13.1|153/205|d.14.1.5| HM:SCP:REP 15->202|1k47A1|1.9e-34|31.1|183/194|d.14.1.5|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 184->324|1kvkA2|2.7e-26|38.6|140/0|d.58.26.3|1/1|GHMP Kinase, C-terminal domain| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------1-----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 155 STR:RPRED 47.4 SQ:SECSTR ####################EEEEEEEcTTcGGGTcccEEEEEEEEEEEEEEEccccEEccTTcccEEEcccccccccccHHHHHHHHHHHHHHHTTccccEEEEEEEcccTTccccHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHGGGTcccccHHHHHHHHccTTcEE######################################################################################################################################################## DISOP:02AL 1-2, 325-327| PSIPRED ccccccccccccccEEEEEccEEEEEEEcEEEEcccEEEEEEcccEEEEEEEEcccccccccccccEEEEccccccccccccHHHHHHHHHHHHHccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHcccEEEEEccccEEcccccccEEEEEEcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccEEEEEccccccEEEEEEccHHHHHHHHHHHHHHccEEEEEEEcccccc //