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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57056.1
DDBJ      :             putative phosphomevalonate kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  64/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.58.26
:368 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->305 3k17A PDBj 4e-26 32.0 %
:RPS:PDB   2->271 2aj4B PDBj 3e-16 11.5 %
:RPS:SCOP  2->214 1k47A1  d.14.1.5 * 1e-39 27.2 %
:RPS:SCOP  216->356 1k47A2  d.58.26.4 * 2e-23 27.1 %
:HMM:SCOP  1->234 1k47A1 d.14.1.5 * 8.9e-43 39.2 %
:HMM:SCOP  215->361 1k47A2 d.58.26.4 * 6.7e-27 34.1 %
:HMM:PFM   118->177 PF00288 * GHMP_kinases_N 2.3e-13 38.3 60/68  
:HMM:PFM   290->352 PF08544 * GHMP_kinases_C 8.1e-10 34.5 58/82  
:BLT:SWISS 6->181 KIME_AERPE 3e-07 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57056.1 GT:GENE BAD57056.1 GT:PRODUCT putative phosphomevalonate kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2383430..2384536 GB:FROM 2383430 GB:TO 2384536 GB:DIRECTION + GB:PRODUCT putative phosphomevalonate kinase GB:PROTEIN_ID BAD57056.1 LENGTH 368 SQ:AASEQ MISERAPGKLFVAGEYAVVEPGRHAILTAVDRYATATVRASHTDAAVTVCTDLGQGVQLACRRAGTGLVPANGRARPRAELAYVFAAAAVVERLLIERGHPVLPCRVAVTADLADRSGRKFGLGASAAVTAATVAALGRFHRLGLSRMDRYRLAMLATLSVDPAASGGDVAASTWGGWLVYGSPDRRWVSETLATRSVTELLSRPWPGLSVHRLPPPARSALRVGWTGTPVATPGLVRSVRRGRDRRAGDYRAFVAATEECVRALARALEADEPGAVHAGILRARELLVHLDSVARAGIMTPRLRALCAAGDAVGAAAKPSGAGGGDCGIAFLDPADTAALAELADRWRAAGIEPLTVRPHPRQEADT GT:EXON 1|1-368:0| BL:SWS:NREP 1 BL:SWS:REP 6->181|KIME_AERPE|3e-07|30.4|158/324| SEG 79->91|aelayvfaaaavv| SEG 125->136|asaavtaatvaa| SEG 237->253|vrsvrrgrdrragdyra| SEG 306->326|alcaagdavgaaakpsgaggg| BL:PDB:NREP 1 BL:PDB:REP 5->305|3k17A|4e-26|32.0|281/347| RP:PDB:NREP 1 RP:PDB:REP 2->271|2aj4B|3e-16|11.5|253/505| HM:PFM:NREP 2 HM:PFM:REP 118->177|PF00288|2.3e-13|38.3|60/68|GHMP_kinases_N| HM:PFM:REP 290->352|PF08544|8.1e-10|34.5|58/82|GHMP_kinases_C| RP:SCP:NREP 2 RP:SCP:REP 2->214|1k47A1|1e-39|27.2|184/185|d.14.1.5| RP:SCP:REP 216->356|1k47A2|2e-23|27.1|129/135|d.58.26.4| HM:SCP:REP 1->234|1k47A1|8.9e-43|39.2|194/194|d.14.1.5|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 215->361|1k47A2|6.7e-27|34.1|135/0|d.58.26.4|1/1|GHMP Kinase, C-terminal domain| OP:NHOMO 65 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- ------------1-----------1------1----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111111---111111111111111111111111111111111111111---------111-111------------------------111---1111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 358 STR:RPRED 97.3 SQ:SECSTR cEEEEEEEEEEEEcTTcGGGTccEcEEEEEEEEEEEEEEEccccccEEEEEEccTTcccEEEEccTccTTcccHHHHHHHHHHHHHHHHHHHcHHHHcccccccEEEEEEEcccTTcccccHHHHHHHHHHHHHHHHHHcTTccccHHHHHHHHTTGGGGGTcccccHHHHHHHHccTTcEEEEEcccccEEEEEccTTEEEEEEEccccccccccccEEEEEEEEccccccTTTTTTTTHHHHHHHHHHHHHHHHHHHTccccccccHHHHHHHHHHHHHcccccccccHHHHHHTccccHHHHHHHHHHHTTccEEEEcccccccEEEEEEEGGGHHHHHHHHHHHHHHcccccEE########## DISOP:02AL 360-368| PSIPRED cEEEEEccEEEEEccEEEEccccEEEEEEEccEEEEEEEEEccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHccEEEEEcccHHHHHHHHHccccHHHHHccccccEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEccccccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEEEcccccccc //