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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57061.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  173/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:545 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   75->422 2qmiC PDBj 1e-17 25.0 %
:RPS:PDB   78->418 2efuC PDBj 8e-34 17.3 %
:RPS:SCOP  77->418 1ci8A  e.3.1.1 * 3e-40 22.4 %
:HMM:SCOP  72->431 2drwA1 e.3.1.1 * 1.8e-81 33.7 %
:RPS:PFM   91->403 PF00144 * Beta-lactamase 2e-27 37.4 %
:RPS:PFM   460->542 PF11954 * DUF3471 3e-04 34.6 %
:HMM:PFM   78->415 PF00144 * Beta-lactamase 1e-70 33.6 321/329  
:HMM:PFM   448->538 PF11954 * DUF3471 1e-18 29.5 88/100  
:BLT:SWISS 68->318 BLML2_DICDI 2e-11 24.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57061.1 GT:GENE BAD57061.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2389022..2390659 GB:FROM 2389022 GB:TO 2390659 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57061.1 LENGTH 545 SQ:AASEQ MPCNSSEEVRAVPGRRRVAVGLLALGLVVGACADDSGGDAATTSSAPRSPAATGELPPNEVAGVAIPDGQVDRAVGELDRIAGELMDATKIPGMAVAVVHDGKVVYSKGFGVRDVTTGQPVGPDTVFQLASLSKPIGATVVAREVAAGRVAWDTPVRRLSPEFTLADPYVGDHVTVGDLYAHRSGLPDHAGDLLEDLGYDRAAILARLRQLPLAPFRDSYAYTNFGLTAAASAVAQAAGTDWETLSQREIYEPLGMTSTSSRYADFVARGDRAVGHVLVDGAYRPADPPRRPDAQSPAGGVSSSARDMTRWLTMMLGDGSVEGREIVPPAALLPAVSPQMMSAPPANPDARAGFYGFGFNVGTSPAGRVVLSHSGAFNLGAGTAFTMIPSAGVGIVTLTNAAPRGVPETLNAEFADLVQFGEVREDWRGLYTEAFDQLDAPKGDLVGKEPPRAPAPARPLTDYAGTYANAYYGPATVAVRGDELTVTLGPAGTVVPLRHWDGDTFAFTPSGEGADPGTVSQARFDGDRLTLEYYDQDGMGTFTRG GT:EXON 1|1-545:0| BL:SWS:NREP 1 BL:SWS:REP 68->318|BLML2_DICDI|2e-11|24.9|249/548| SEG 9->53|vravpgrrrvavgllalglvvgacaddsggdaattssaprspaat| SEG 137->151|gatvvarevaagrva| SEG 229->238|aaasavaqaa| SEG 280->294|dgayrpadpprrpda| SEG 327->336|vppaallpav| SEG 450->459|pprapaparp| BL:PDB:NREP 1 BL:PDB:REP 75->422|2qmiC|1e-17|25.0|332/446| RP:PDB:NREP 1 RP:PDB:REP 78->418|2efuC|8e-34|17.3|324/361| RP:PFM:NREP 2 RP:PFM:REP 91->403|PF00144|2e-27|37.4|294/324|Beta-lactamase| RP:PFM:REP 460->542|PF11954|3e-04|34.6|81/99|DUF3471| HM:PFM:NREP 2 HM:PFM:REP 78->415|PF00144|1e-70|33.6|321/329|Beta-lactamase| HM:PFM:REP 448->538|PF11954|1e-18|29.5|88/100|DUF3471| RP:SCP:NREP 1 RP:SCP:REP 77->418|1ci8A|3e-40|22.4|335/377|e.3.1.1| HM:SCP:REP 72->431|2drwA1|1.8e-81|33.7|341/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 421 OP:NHOMOORG 232 OP:PATTERN -----1-----------11-------------------------12-1--1---1-1----------- 256-2----------2122-21--3122222112221421-----1---22--1---1--------1--------------------------------112--43---2----------------------------------11--21--------------1-1111-----------------------1222222241413112-111--443---1---------6-----------------11----------------------------------------------------------------------------1---1222-1-1----------------------2-----------4-36445-------31--1-22221------------111112--112-1------------1122---------1------------------------------------------------121----11--1-1-----111-------1-11-3-------1---2---2---------------------11----------------1-11--------1---------------------------------2--21221-----1-1----1-11-11------1------1----1-------------------------------------1------------------------------------------2----------------------------------------1-111-2----------------------1-1--------2-65222222221111----------------------------------------------------------- ----12--------1122----131-1------2212111111-----123-4-----2111----------------------------212-----------------T----1------1--1----------------111-1--1-1-1---1----175------1----------------------3-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 387 STR:RPRED 71.0 SQ:SECSTR #######################################################cccccccccccccccccccHHHHHHHHHHHHTTTTccEEEEEEEcTTcccEEEEEEEEETTTTEEccTTccEEcGGGHHHHHHHHHHHHHHHTcccTTccGGGTcTTcTTGGGTTGGGccGGGGTTTccccccGGccccccccccHHHHHHHHHHHccccTTccccccHHHHHHHHHHHHHHHcccHHHHHHHHTHHHHTccccEETTTccccGGGccccEEEccTTEEEcTTTccGGGTGGGTcEEEcHHHHHHHHHHHHTTccccHHHHHHHHHccccHHHHTccEEcccTTccEEEEccccEEEEETTEEEEEEEEEEETTTEEEEEEEcTTTccEEEEEEcEEcccTTcHHHHTTHHHHHTcHHHHTTHHHHHHHHHHHHHHT####################################################################################################### DISOP:02AL 1-14, 443-457, 544-545| PSIPRED cccccHHHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccEEEccHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccHHccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHccccccccccccccEEEEEEccccccccEEEEcccccccccEEEEEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEEcccEEEEEcccccccccHHccccccccEEEEEEEccccccccccc //