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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57065.1
DDBJ      :             putative amidase
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  507/915 : Eukaryota  103/199 : Viruses  0/175   --->[See Alignment]
c.117.1d.125.1
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->305 2dc0A PDBj 7e-14 42.1 %
:RPS:PDB   22->391 2dc0A PDBj 2e-35 23.6 %
:RPS:SCOP  22->391 2df4A1  c.117.1.1 * 9e-34 19.0 %
:RPS:SCOP  406->524 1c4kA3  d.125.1.1 * 1e-07 11.9 %
:HMM:SCOP  4->391 1mt5A_ c.117.1.1 * 1.5e-85 37.9 %
:RPS:PFM   22->203 PF01425 * Amidase 3e-19 40.1 %
:HMM:PFM   4->383 PF01425 * Amidase 8.7e-72 33.1 378/435  
:BLT:SWISS 23->530 DUR1_SACKL 2e-80 40.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57065.1 GT:GENE BAD57065.1 GT:PRODUCT putative amidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2392559..2394175) GB:FROM 2392559 GB:TO 2394175 GB:DIRECTION - GB:PRODUCT putative amidase GB:PROTEIN_ID BAD57065.1 LENGTH 538 SQ:AASEQ MTVWIHRRADAEVAAERAAATGPLAGLRLAVKDNVDVAGLPTTAGCPAYAYLPDTDAPAVAALRAAGAVVVGKTNLDQFATGLVGTRSPYGAVPDARRPEFVSGGSSSGSAVAVARGEADLAIGTDTAGSGRVPAAFQGLVGIKPTVGVVRTDGVVPACRSYDCVTIFAADPATADRAMGVLAAGAAGRPWPADARLAAPPNPVVAVFDTLPELDEVWRSAFARTVDALRARGVTVVPIDPAPFLAAARLLYDGALVAERYSAVGEFVDAHPGEVDPTVGAIIGAARTHPAHRLVSDLAELDRLRGLAMTSLAGADALLAPTAPAQPTLAEVAADPIGVNARLGTYTNFANLLDLCAVAVPAGTAGAAQFGVTVFARAFEDAVALDIAALIRPDAALAPVSWPARVAPTQELIVFGAHLRDQPLASQLTDLGARWAGEVRTAPRYRLAALKTTPPKPALTRVGEAETGVAIAGERWLLSPAALGRFLAALPAPMHLGAVELADGSWATGFGCEGAAAAAATDISAYGGWRAALAANAV GT:EXON 1|1-538:0| BL:SWS:NREP 1 BL:SWS:REP 23->530|DUR1_SACKL|2e-80|40.6|507/1830| SEG 7->20|rradaevaaeraaa| SEG 57->71|apavaalraagavvv| SEG 102->115|vsggsssgsavava| SEG 312->330|lagadallaptapaqptla| SEG 357->368|avavpagtagaa| SEG 515->520|aaaaaa| BL:PDB:NREP 1 BL:PDB:REP 22->305|2dc0A|7e-14|42.1|266/432| RP:PDB:NREP 1 RP:PDB:REP 22->391|2dc0A|2e-35|23.6|360/432| RP:PFM:NREP 1 RP:PFM:REP 22->203|PF01425|3e-19|40.1|177/425|Amidase| HM:PFM:NREP 1 HM:PFM:REP 4->383|PF01425|8.7e-72|33.1|378/435|Amidase| GO:PFM:NREP 1 GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF01425|IPR000120| RP:SCP:NREP 2 RP:SCP:REP 22->391|2df4A1|9e-34|19.0|368/485|c.117.1.1| RP:SCP:REP 406->524|1c4kA3|1e-07|11.9|118/161|d.125.1.1| HM:SCP:REP 4->391|1mt5A_|1.5e-85|37.9|383/537|c.117.1.1|1/1|Amidase signature (AS) enzymes| OP:NHOMO 1086 OP:NHOMOORG 657 OP:PATTERN 11-1--1322222222--11111121111111-11--11111111111111111------------1- 12512113--111121111-11---512111-4323336314233121122141111-1112311432112-111111-111111--1--------1--------1-11111111111-111111111-111111122222111132112112--1111-2111-132232-11-1--11-113232211-411111111111111111211-111112211111------15--------------------1111111-111----111-1-121111111111111111111111111111111111111111111111111-211111111111--111---111--1111122111-1111---11--2111221------1645---5236222222221123-33242337322-6--32232412174-2-222222222221222222211111----------11---------------------34--61226212231-22224477222114256-362-21--22-11213143-3----------------11121--11--1111--11-----1-1-11121211---------------------2-------21-1--2-3------------------2----111-------112--1-----------------------------113111-------------------1------------------------------111121--2---------------33333-1----21111--121-11-1436---------1----------------2212------------------1111111111---------1---1----11---1111-1-1-2---111 ------1-------222221112-3--11-1111-1111111111111134322231-1111322222112231121121222122-1-23-2-1--11211-11--2--4----------1-----------------------------------------3-------111--422D122533458142------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 371 STR:RPRED 69.0 SQ:SECSTR ####################ccTTTTcEEEEETTcccTTccccTTccccccccccccHHHHHHHHTTcEEEEEEcccGGGcccccccTTTccccccccTTcccccccHHHHHHHHHTccccEEEEccccTTHHHHHHHTcEEEEccTTccccTTcccccTTTccEEEEEccHHHHHHHHHHHHTcccccccccccEEEEcHHHHTTGGGGcTcccHHHHHHHHHHHHHTTTTTcEEEEcccEccTTHHHHHHHHHHHHHHHHHcHHHHHHcGGGccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHTTccEEEEEccccccccTTccEEEETTEEEEHHHHHHTTTHHHHHTTccEEEEEEEEETTEEEEEEEEccTTcHHHHHHHHHHH################################################################################################################################################### DISOP:02AL 538-539| PSIPRED ccHHHHHHHHHHHHHHcccccccccccEEEEEEEEcccccccccccHHHccccccccHHHHHHHHcccEEEEEEcccHHHccccccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccHHHcccEEEccccccccccccccccccccccEEEcccHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccccccccHHHHHcccEEEEEEEcccccEEEEEccccccccEEEccccccccEEEEEEEEccHHHHHHHHHccccccEEEEEEEccccEEEEEEEccccccccHHHHHHccHHHHHHHccc //