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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57066.1
DDBJ      :             putative allophanate hydrolase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  170/915 : Eukaryota  58/199 : Viruses  0/175   --->[See Alignment]
b.62.1d.74.5
:673 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   367->573 2phcB PDBj 5e-06 24.6 %
:RPS:PDB   582->668 3dtzA PDBj 8e-19 11.9 %
:RPS:SCOP  364->424 2phcB2  d.74.5.1 * 3e-13 28.3 %
:RPS:SCOP  474->607 2phcB1  b.62.1.4 * 7e-31 24.6 %
:RPS:PFM   44->314 PF02626 * AHS2 4e-26 36.7 %
:RPS:PFM   362->574 PF02682 * AHS1 2e-16 40.1 %
:HMM:PFM   43->321 PF02626 * AHS2 8.5e-85 43.3 268/272  
:HMM:PFM   363->581 PF02682 * AHS1 4.1e-50 37.8 193/202  
:BLT:SWISS 22->658 DUR1_YEAST e-113 35.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57066.1 GT:GENE BAD57066.1 GT:PRODUCT putative allophanate hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2394172..2396193) GB:FROM 2394172 GB:TO 2396193 GB:DIRECTION - GB:PRODUCT putative allophanate hydrolase GB:PROTEIN_ID BAD57066.1 LENGTH 673 SQ:AASEQ MNPGTVLAPAPAVRPAPTPRCEVVRPGMLTTVQDWPGRVGYWHVGVPPSGPMDDLSFRLGNRALGNAEGAAGLECTLAGPALLFPVATRVCVTGAPADVRVDGVPVPQWRPVVVPAGGVLDVGAVRGPGMRCYVLVAGGFAVRPYLGSAATFTLGGFGGGTGAAVRAGDLLDLTPDHGRPGTAVPAEARPAFTRRWELAVTEGPHGAPEFFTRADIDTILSTAYEVHFNSDRTGVRLIGPKPRWARADGGEAGLHPSNIHDTAYSIGALDFTGDTPILLGPDGPSLGGFVCPVTVVAAERWKLGQLCPGDLVRFVPVRAERAAALRELGPARRAAWPVVLSDGGDGDDGVLGMADGDEHTRVTYRRAGDDGVLVEYGEMTLDLGLRARVHALHQHLLARAEPGITELTPGVRSLQVRTDPDRLPTPKLLDLLTEAEAALPAADDLVVPSRTVHLPLSWDDPATREAITRYMHGVRADAPWCPWNIEFIRRMNGLSSVREVFDTVFAAEYLVLGLGDVYLGAPVATPTDPRHRLVTTKYNPARTWTPQNAVGIGGAYLCIYGMEGPGGYQFVGRTTQVWNHRGTDGADPWLLRWFDRIRWYSVSAEELLDLRADVAAGRGGLHAEDGEFRLADYRRFLAENAESIAEFRANQAKAFAAERRSWHSSGELTGDQQ GT:EXON 1|1-673:0| BL:SWS:NREP 1 BL:SWS:REP 22->658|DUR1_YEAST|e-113|35.4|635/1835| SEG 5->20|tvlapapavrpaptpr| SEG 59->74|lgnralgnaegaagle| SEG 104->115|vpvpqwrpvvvp| SEG 147->168|gsaatftlggfgggtgaavrag| SEG 315->335|vpvraeraaalrelgparraa| SEG 342->357|dggdgddgvlgmadgd| SEG 428->445|lldllteaeaalpaaddl| SEG 509->520|ylvlglgdvylg| BL:PDB:NREP 1 BL:PDB:REP 367->573|2phcB|5e-06|24.6|179/216| RP:PDB:NREP 1 RP:PDB:REP 582->668|3dtzA|8e-19|11.9|84/207| RP:PFM:NREP 2 RP:PFM:REP 44->314|PF02626|4e-26|36.7|259/271|AHS2| RP:PFM:REP 362->574|PF02682|2e-16|40.1|187/202|AHS1| HM:PFM:NREP 2 HM:PFM:REP 43->321|PF02626|8.5e-85|43.3|268/272|AHS2| HM:PFM:REP 363->581|PF02682|4.1e-50|37.8|193/202|AHS1| RP:SCP:NREP 2 RP:SCP:REP 364->424|2phcB2|3e-13|28.3|60/84|d.74.5.1| RP:SCP:REP 474->607|2phcB1|7e-31|24.6|126/132|b.62.1.4| OP:NHOMO 319 OP:NHOMOORG 229 OP:PATTERN -------------------------------------------------------1------------ --1-1--1------1----------1-------1111132----11---11-1-1-----111---121----------------------------------1-----------------------------------------2---1----------------1------------------------2-----------------11111-----11-----------1-------------------------------------------------------------------------------------------1--------------------------1--1-----2--1----1-1-----111-------1--2---111-1------------11-1111---1-5--311-311--11-----------2-1-1111111---11---------------------------------1---31--2-1133-233332222333311332-2-1--111-----11-2-3------1---------221--1-----------------------------1-1---------------------1-------1-111----11111-------------1-----11-------224--1-------------------------------1-22-------------------2----------------------------------11------------------21121-----122222-21422221-232---------1----------------1--------------------------------------------------------------------1- ---------------1-11111111-111--------------111---21222111-----211111111121111-11111111---121-----11-1---------------------------------------------------------1-----------------11-----11----1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 40.7 SQ:SECSTR ##############################################################################################################################################################################################################################################################################################################################################################################ccTTEEEEEccc#cccHHHHHHHHHHHHHHHHHccTTEEEEEEETTEEEEEEcTTTccHHHHHHHHHHHHHHHHHH####HHTTEEEEEEEEcTTTcTT###################HHHHHHHHTcc####HHHHHHHHHcccEEEEEEETTTTEEEEEcccGGGccccccccEEEEcTTEEEEEcTEEEEEcccEEHHHccccccccHHHHHTcccccEEEEEEEEcHHHHTccHHHHHHHHHHHHHHHccEEEEEEcTTTccccEEEEEEEccHHHHHHHHHHTTcGGGGGEEccccc##### DISOP:02AL 1-3, 653-654, 667-673| PSIPRED cccccccccccccccccccEEEEEccccHHHHHHcccccccHHccccccccHHHHHHHHHHHHHcccccccEEEEEEcccEEEEcccEEEEEEcccccEEEccEEcccccEEEEccccEEEEEcccccccEEEEEEEcccccHHHHccHHHHHHHHcccccccccccccEEEcccccccccccccHHHccccccccEEEEEEccccccccccHHHHHHHcccccEEcccccEEEEEEEcccccccccccccccccccccccccEEEEEEEccccccEEEcccccccccccEEEEEEccHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHEEccccccccEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEccccccEEEEEEccccccHHHHHHHHHHHHHHccccccccccccEEEEEEEEcccHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHHccccEEEEEEEcccccccccccccHHHHcccccccccccccccccHHHccccEEEEEcccccccEEEEEEEEHccccccccccccEEccccEEEEEEccHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //