[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57067.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
:205 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->185 3di4B PDBj 3e-04 28.6 %
:RPS:PDB   8->205 3di4A PDBj 2e-05 19.8 %
:RPS:PFM   11->178 PF09347 * DUF1989 6e-38 49.7 %
:HMM:PFM   11->178 PF09347 * DUF1989 6.3e-67 52.1 167/167  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57067.1 GT:GENE BAD57067.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2396222..2396839) GB:FROM 2396222 GB:TO 2396839 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57067.1 LENGTH 205 SQ:AASEQ MSTRARTVVLDETVPARAPWSAVVAAGDQLEIIDLHGNQAVDCLLYAAADHSDRYSAQATVAAQRNIFLTTGSVLRTDNGTALMTVVADDVGNHDTVAGACSQESNTLRYGHHTRDQHACVENFLTAAMAWGLGKRDLVSNINWFMNVPVEPDGTLGIVDGRSAPGKKVVLRAEIDTLVLVSNCPQINNPCNGFDPTPVRMVVTR GT:EXON 1|1-205:0| BL:PDB:NREP 1 BL:PDB:REP 14->185|3di4B|3e-04|28.6|168/268| RP:PDB:NREP 1 RP:PDB:REP 8->205|3di4A|2e-05|19.8|197/275| RP:PFM:NREP 1 RP:PFM:REP 11->178|PF09347|6e-38|49.7|165/167|DUF1989| HM:PFM:NREP 1 HM:PFM:REP 11->178|PF09347|6.3e-67|52.1|167/167|DUF1989| OP:NHOMO 253 OP:NHOMOORG 132 OP:PATTERN -------------------------------------------------------------------- --2-1--1------3------1---3------233312221---2----2--2-2------------2-------------------------------1---1-----------------------------------------1---2----------------2------------------1-----2-1-------------------11-----------------2----------------------------------------------------------------------------------------------------------1------------------------------------222-------3-1----22212------------33134-31--3-4--232-3431133------1-1111-2-2222222---3--1-----------------------------1-2---------2222--------23-------26-2-------1-----2---2-1----2---------222--2-----------------------------2-----------------------2-------21-2--1-------------------------122---------2----------------------------------2-22-----------------------------1-------------------------2------------------22222------2------213----2222---------2--------------------------------------------------------------------------------------- ----------------1------11-------------------------11-1--------------------------------------1---------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 197 STR:RPRED 96.1 SQ:SECSTR #######EEEEEEEccTcEEEEEEcTTcEEEEEEccccccEEEEEEETTEEEEEccHHHHHHHHcccccTTcEEEccTTTccEEEEEEETEEEEcccccccHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHTccccEEEEEEEEcTTTccEEEcccccTTcEEEEEEcccEEEEEEEcTT#TTcccccccccEEEEEEE DISOP:02AL 1-4| PSIPRED ccccHHccEEEEEEcccccEEEEEccccEEEEEEccccEEEEEEEEcccccccEEcHHHHHHHHcccccccccEEEEccccEEEEEEEccccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHccccccccccEEEEEccccccccEEEEEccccccccEEEEEEcccEEEEEEcccccccccccccccEEEEEEEc //