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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57071.1
DDBJ      :             putative alcohol dehydrogenase
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  589/915 : Eukaryota  105/199 : Viruses  0/175   --->[See Alignment]
e.22.1
:430 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   24->393 3bfjA PDBj 3e-56 35.4 %
:RPS:PDB   13->414 2bi4A PDBj 7e-59 29.8 %
:RPS:SCOP  21->414 1rrmA  e.22.1.2 * 5e-81 31.1 %
:HMM:SCOP  7->430 1vljA_ e.22.1.2 * 1.9e-90 35.5 %
:RPS:PFM   24->411 PF00465 * Fe-ADH 3e-51 36.7 %
:HMM:PFM   20->412 PF00465 * Fe-ADH 9.4e-93 35.5 361/365  
:BLT:SWISS 10->424 MEDH_RHOER e-155 65.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57071.1 GT:GENE BAD57071.1 GT:PRODUCT putative alcohol dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2400284..2401576 GB:FROM 2400284 GB:TO 2401576 GB:DIRECTION + GB:PRODUCT putative alcohol dehydrogenase GB:PROTEIN_ID BAD57071.1 LENGTH 430 SQ:AASEQ MQVDELLKPFPIKEFHPFPRALLGPGSHEIIGPEALKLGFKKVLVMTSGLRGTDIVPKIVGSLEYHGLEVVLYDKVESNPKDYNVMDAVALYQQHGCDSFVSIGGGSSHDACKGARISIAHDGRNINEFEGFNKSENPKNPPHIAVSTTAGTGSETSWAYVITDTTTDPDNPHKYVAFDDASVATLAIDDPVLYFDCPTDYTAQCGFDVLAHGSEPFVSRLNFTPSIGNALYAIKLVAENLRTATWNPTELSGREGMMYAQYIAAQAFNSGGLGIIHSISHAVSAFYDTHHGLNNAIALPRVWAFNMPVAYKKFAEIAGAMGVDTYGMTDVQAADAALGAAVRLLRDVGIPEKFTDITKDTYSKNRLGQGPTKYYENASVIKGNDEDIDRITRHVLGDACTPGNPKECTFETVRPVVEHCMHGSLDDLLS GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 10->424|MEDH_RHOER|e-155|65.9|411/423| SEG 330->348|dvqaadaalgaavrllrdv| BL:PDB:NREP 1 BL:PDB:REP 24->393|3bfjA|3e-56|35.4|364/382| RP:PDB:NREP 1 RP:PDB:REP 13->414|2bi4A|7e-59|29.8|372/382| RP:PFM:NREP 1 RP:PFM:REP 24->411|PF00465|3e-51|36.7|357/364|Fe-ADH| HM:PFM:NREP 1 HM:PFM:REP 20->412|PF00465|9.4e-93|35.5|361/365|Fe-ADH| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00465|IPR001670| GO:PFM GO:0046872|"GO:metal ion binding"|PF00465|IPR001670| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00465|IPR001670| RP:SCP:NREP 1 RP:SCP:REP 21->414|1rrmA|5e-81|31.1|363/385|e.22.1.2| HM:SCP:REP 7->430|1vljA_|1.9e-90|35.5|392/0|e.22.1.2|1/1|Dehydroquinate synthase-like| OP:NHOMO 1783 OP:NHOMOORG 722 OP:PATTERN 11111-----1--1--1----1-3----------1---1---111-11--111-1211221--2---- -1------222----------1--14-----141112345-1------1---131----------12----21112323122-11-1121121-----------1----1---------------112211111-122222111112-11--111-----11---1------------------1---433433222223332333333625453333263521333333431111111111111111-11--313-22-21-1223322311112111111111111122222222222-111111111111211---11112446A555555585945FF3786564123552244569122326424223-111--------1-2-----2522311111111112--15--4-2421-3442323534333-112-1221221111-1111113-----12-----------------------------1-2111-53122223313111111211222324114442-1122121111143121111--12--------1--1---642A356468556-42442-6A3----12---112----1------------1-----43822-123-22332323623342433453-------------64552415447577765-4555576555476555556798342347655676666666656234344451-222223222222---------1111-1225333415--------133333332222-33131522444313222---111-1-122231111133423-----------------211------------1-1------------------2------3223432233--2 --1111--21-4--11122-2221--21111111111111111111---1-111------------1-1------11111------21--1-11-1---1----1--131-1211231--111-11-1-381-231----1-1111-1--1-111111-----2----127--2--322811-1-----2--1-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 421 STR:RPRED 97.9 SQ:SECSTR ########cEEEccccccccEEEcTTGGGGHHHHHHHTTccEEEEEccHHHHTTTTHHHHHHHHHTTcEEEEEccccccccHHHHHHHHHHHHTTTccEEEEEccHHHHHHHHHHHHHTTcGGGccccTTcEEcccccccccEEEEcccccccTTTccEEEEEETTEccTTccEEEEEcTTccccEEEEcHHHHTTccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHTTHHHHHTTcHHHHHHHHHHHHHHHHHHHHTTTcccHHHHTTHHHHHHHcccHHHHHHHHHHHHHHHHGGGcTTHHHHHHHTTTcccTTccHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTccccTTTHHHcTTcccccTTccGGGHHHHHHHHHHcGGGGGccccccHHHHHEEcccccEEccHHHH# PSIPRED ccHHHHcccccHHHHccccEEEEcccHHHHHHHHHHHccccEEEEEcHHHHHccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHcccccHHHHHccccccccccccEEEEEccccccccccccEEEEccccccccccccccccHHHccEEEEEcHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHc //