[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57072.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  231/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   107->191 1qvrA PDBj 3e-04 37.0 %
:BLT:PDB   181->262 1t36B PDBj 5e-06 34.6 %
:RPS:PDB   131->296 2dhrD PDBj 6e-10 22.2 %
:RPS:SCOP  122->245 1d2nA  c.37.1.20 * 3e-06 10.6 %
:HMM:SCOP  32->295 1p6xA_ c.37.1.1 * 1.2e-34 25.1 %
:RPS:PFM   132->204 PF07728 * AAA_5 4e-05 41.7 %
:HMM:PFM   39->204 PF07728 * AAA_5 1e-15 32.0 125/139  
:HMM:PFM   219->297 PF08406 * CbbQ_C 0.00026 32.0 75/86  
:BLT:SWISS 181->288 CARA_SALTY 4e-06 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57072.1 GT:GENE BAD57072.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2401658..2402749 GB:FROM 2401658 GB:TO 2402749 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57072.1 LENGTH 363 SQ:AASEQ MNHFASTEDVHSALAAVGYLPDERLATTVFLMTRLEKPLLIEGPAGVGKTELAKALAAATGRKLLRLQCYEGQDETRALYEWDYGRQLLYTQILREKIGQFVADTADLGEAVDRIGAHDSVFYSERFLSPRPLLEAIRSTEPVVLLIDEIDRADEALEAVLLEILGEYQISVPEVGTFTARQAPLVILTSNNTRDLSAALKRRCLHLFADYPDAERELEIIRSKNTGLDDSLAAELVEIVRGLRGLDLRKAPSISETVDWARTLAVLQVRALSRQVLSDTMSVVVKYDKDLRTALEELPRLLDGTAPTRPAAAPEDDGRAVRAAKDDAGRFDDGYYGAHTATLTRATVTSSQGARSFARRRGV GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 181->288|CARA_SALTY|4e-06|32.7|107/382| SEG 48->67|gktelakalaaatgrkllrl| BL:PDB:NREP 2 BL:PDB:REP 107->191|1qvrA|3e-04|37.0|81/803| BL:PDB:REP 181->262|1t36B|5e-06|34.6|81/379| RP:PDB:NREP 1 RP:PDB:REP 131->296|2dhrD|6e-10|22.2|162/445| RP:PFM:NREP 1 RP:PFM:REP 132->204|PF07728|4e-05|41.7|72/135|AAA_5| HM:PFM:NREP 2 HM:PFM:REP 39->204|PF07728|1e-15|32.0|125/139|AAA_5| HM:PFM:REP 219->297|PF08406|0.00026|32.0|75/86|CbbQ_C| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF07728|IPR011704| GO:PFM GO:0016887|"GO:ATPase activity"|PF07728|IPR011704| RP:SCP:NREP 1 RP:SCP:REP 122->245|1d2nA|3e-06|10.6|123/246|c.37.1.20| HM:SCP:REP 32->295|1p6xA_|1.2e-34|25.1|255/0|c.37.1.1|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 357 OP:NHOMOORG 240 OP:PATTERN 22----------11------------------111-----------------------------1--- ---21---------11122-21--2322222222222244-112----------1-------4--1211-------------1----------------------------------------------1---1--22222---11--1--------------------14-------------1----------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1----333-21--22----------1112-------46511132333------------11211211133-2--1--2---11111213312222223--------1----121------------------------------1111-111111111111111111221111111142222-122211111212122111----11----------111-222-----------111-1-11111112221---------------------------11-11-1121-------1----------------1---------------------------------------------------------------------------------------------------------21-----------------11111111111-111111111111111-1------------------------------------------111111----------------------------------------------1-- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 209 STR:RPRED 57.6 SQ:SECSTR ##############################################################################################HHHHHHHHHHHTTcEEEEEcHHHHTTccTTHHHHHHHHHHHHHHHccccEEEEEcHHHHcccccHHHHHHHHHHHHHTHHGGTccTTcccEEEEEEccGGGccGGGGcTTcEEEcccccHHHHHHHHHcccccccTTTTHHHHHHccccccHHHTcccccccTTTHHHHHHccTTGGGTcccccTTHHHHHHHHHHHHHHHTTcccccc############################################################ DISOP:02AL 1-2, 346-357, 362-363| PSIPRED ccccccHHHHHHHHHHccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHcccEEEEEccccccccHHHccccHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHcccccccccccEEEccHHHHHHHcccccEEEEEccccccHHHHHHHHHHHcccEEEEccccEEEEccccEEEEEEcccccccHHHHccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccccccccEEEEEEEEEcccHHHHHHHHHccc //