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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57078.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  141/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:501 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   84->184 2z87B PDBj 5e-06 36.6 %
:RPS:PDB   89->320 2bo4A PDBj 1e-18 16.4 %
:RPS:SCOP  64->292 1xhbA2  c.68.1.17 * 2e-19 17.5 %
:HMM:SCOP  85->304 1omzA_ c.68.1.15 * 1.3e-41 37.6 %
:RPS:PFM   87->185 PF00535 * Glycos_transf_2 2e-07 34.3 %
:HMM:PFM   89->190 PF00535 * Glycos_transf_2 5.1e-18 26.5 102/169  
:BLT:SWISS 10->305 YTH1_RHOER 3e-59 49.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57078.1 GT:GENE BAD57078.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2408612..2410117) GB:FROM 2408612 GB:TO 2410117 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57078.1 LENGTH 501 SQ:AASEQ MTVGVLARRIVLDRSVHRFDRGRVLLGGSPMRLVRLSAAGARLLAGWVDGGPIGADEGSARLLRRLLDSGLVHPVAAPGSRSPDEVTLVVPVKDNPAGLARLLAATTEFAHRVIVDDGSADAVPTATIRHPRPLGPAAARNAGWRRATTEFVAFVDSDVVPRPGWLDSALALFDDPRVAAVAPRVTSPPGTAAPTRVAAYEASHSSLDMGADPAVVRPLSRVGYVPTAALIVRRAALAELGGFDERLRFGEDVDVVWRLTDAGHLVRYHPAAVVTHRPRATLGSWLRQRYDYGTSAAPLSRRHPGRLACARVSAWHALSWGALVVALGPARPDRAARGLRRAARSPVLRGSAVVVPALVATALPARRLRGRGVPTAAALAVGAGGHLAAGLALADAVRRTWWPVLMGTRLGRRLVLLSLLPCLVEALRGRRGPAWFAMRLADQAAYSLGVWAGCLRARTAAPLLPDLRVGTGARPGRAAPSTPLRASASRPRVDRPAQAAS GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 10->305|YTH1_RHOER|3e-59|49.1|287/513| SEG 32->45|rlvrlsaagarlla| SEG 326->344|algparpdraarglrraar| SEG 352->369|avvvpalvatalparrlr| SEG 376->396|aaalavgagghlaaglalada| SEG 404->427|vlmgtrlgrrlvllsllpclveal| BL:PDB:NREP 1 BL:PDB:REP 84->184|2z87B|5e-06|36.6|101/591| RP:PDB:NREP 1 RP:PDB:REP 89->320|2bo4A|1e-18|16.4|225/380| RP:PFM:NREP 1 RP:PFM:REP 87->185|PF00535|2e-07|34.3|99/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 89->190|PF00535|5.1e-18|26.5|102/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 64->292|1xhbA2|2e-19|17.5|229/316|c.68.1.17| HM:SCP:REP 85->304|1omzA_|1.3e-41|37.6|213/0|c.68.1.15|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 234 OP:NHOMOORG 155 OP:PATTERN --------1111-1--1--------11--------1--------------111--1-------1---- -12--2-1----1-12322-21112122222223232323-2111------11-----------3332421-----------2----------211--------11--1----------------1211--2311114432---111112111--------------2121-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1--------------11--------1----1---------------------3--313----1---12-111--1--1-1-----------------------22-------------------------------11------1-------1111----1111-----13----11---1------1---1-----------------11--1---2--3-11--1-3--12-2--1----1--------------------------------------------------------------1-------------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------12122111------------------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 275 STR:RPRED 54.9 SQ:SECSTR #############################################HHHTTcccHHHHHTccTTccccccccGGGGTccEEcccccEEEEEEcccccHHHHHHHHHHcTTccEEEEEEccccHHHHHcccccHHHHHHHHHHHHHHHccccEEEEccTTcccccHHHHHHHHHHHHTTccEEEEEccccTTccHHHHHTHHHHHHHHcTTcccGGEGccGGGcccTTcccEEEEHHHHHHHHHcHHHHcTTHHHHHHHHHHHTTccEEEEEcTTccccccccGGGGHHHHHHHHHHHHHHTTccccccccEEEcccccccH##################################################################################################################################################################################### DISOP:02AL 73-80, 480-501| PSIPRED cccccEEEEEEEccccEEccccEEEEcccHHHHHHHHHHHHHHHcccccccEEcccHHHHHHHHHHHccccccccccccccccccEEEEEEEcccHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHcccccHHHHHHHHHHHHcccEEEEEccccEEcHHHHHHHHHHHHccccEEEEEEEEEcccccccHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccEEEEEccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccEEEcccccccccccccccccccccccccccccccc //