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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57079.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  423/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->364 1gylB PDBj 1e-46 41.1 %
:RPS:PDB   10->380 2a7nA PDBj 1e-37 29.2 %
:RPS:SCOP  43->82,239->382 1vcfA1  c.1.4.1 * 5e-28 24.8 %
:HMM:SCOP  7->383 1huvA_ c.1.4.1 * 1.3e-79 33.0 %
:RPS:PFM   18->383 PF01070 * FMN_dh 9e-54 45.2 %
:HMM:PFM   18->378 PF01070 * FMN_dh 1.9e-108 41.3 346/355  
:BLT:SWISS 18->381 LLDD_ERWCT 2e-51 35.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57079.1 GT:GENE BAD57079.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2410114..2411286) GB:FROM 2410114 GB:TO 2411286 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57079.1 LENGTH 390 SQ:AASEQ MASTKDWFETVAEAQERAKKRVPEPVYRALLAGSQAGVTLADNTAAFAELGFRPHIADLPPVRSQATTVLGQEISLPVIISPTGVQAVDPHGEVGVARAAAASGTAMGLSSFASKPIEDVIAANEKVFFQIYWLGDKDAMLARLDRAKRAGAKGLIVTLDWVFATARDWGSPPLPERIDVRTAIRFAPRVLTRPGWLWRFLRAGALPDLTTPNLVGAGETGPTFFGAYGEWMGTPPPTWADLAWLREQWSGPLLIKGITHPDDARRAVDIGATAISVSNHGGNNLDSTPAAIRLLPGIAEAVGDQLEVLLDGGVRRGSDVVKAVALGARAVMIGRPYLWGMAAGGERGVHNVLEILRQGIDSTLYGLGRADIHDVRAEDVLVPDGFRRGL GT:EXON 1|1-390:0| BL:SWS:NREP 1 BL:SWS:REP 18->381|LLDD_ERWCT|2e-51|35.0|354/386| SEG 95->111|gvaraaaasgtamglss| BL:PDB:NREP 1 BL:PDB:REP 11->364|1gylB|1e-46|41.1|321/350| RP:PDB:NREP 1 RP:PDB:REP 10->380|2a7nA|1e-37|29.2|346/353| RP:PFM:NREP 1 RP:PFM:REP 18->383|PF01070|9e-54|45.2|323/328|FMN_dh| HM:PFM:NREP 1 HM:PFM:REP 18->378|PF01070|1.9e-108|41.3|346/355|FMN_dh| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01070|IPR000262| RP:SCP:NREP 1 RP:SCP:REP 43->82,239->382|1vcfA1|5e-28|24.8|179/299|c.1.4.1| HM:SCP:REP 7->383|1huvA_|1.3e-79|33.0|342/0|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 1335 OP:NHOMOORG 609 OP:PATTERN ---------------------1-1----1--1-----------------------------1------ --3141-111111-24422-22113322222222224252-3232111----1111-1--212-31512-1-----------3-----------------1---1---------------------------------------21-1-------------------1112--11-----11-1211----1-----------------------------1---------1----------------------1--12--1-111--222-1---1-----1------11111-111111111111111111-----------11--1111111-1-12---1112------1-----1---12--------11-1221-11111-3221111111111111111111---1--1-3232-333333133335412212351111323---------111-1-------------------------------11251-23232-1121-3333222133333-3--51331-1---1223363212211---1---111111111--3---2-1111-11111----1----------1--1-1----------------------------1-1-1----------------------------------11---1-1111122111-111111111111111111122211121211222122122222211111111---11111111111---------------122111-1-11111---111111111121122221--221111---1212222221-----11111-11--1111111111-------1111111------------------------------------------------- ----11------111AB86A876DDEC33344433334343444345567ACNK68632434233-23211241221-1121111211-7E5B3735452413112-1--M222224222221222232473-22312222125122212222422223332-5121223131821112H1211154A77722242216 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 97.9 SQ:SECSTR ########ccHHHHHHHHHHHccHHHHHHHHcccTTcHHHHHHHHGGGGEEEccccccccccccccEEETTEEEcccEEEccccGGGTcTTHHHHHHHHHHHHTccEEEcTTccccHHHHHHHccccEEEEEccccHHHHHHHHHHHHHTTccEEEEEcccccccHHHHHcccccccHHHHHHTccccTTcccGGGTTcccccGccHHHHHTcccTcccTTTHHHHHHTcccccTTccHHHHHHHHHHcccEEEEEEEccHHHHHHHHHTTccEEEEccGGGTccTTcccGGGcHHHHHHHHcTcccEEEccccccHHHHHHHHHTTcccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccGGGccGGGEEEcccccTcc DISOP:02AL 1-4, 212-220, 389-390| PSIPRED ccccccccccHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHcccccccccEEEEEcEEEccccHHccHHHHcccHHHHHHHHHHHHHcccEEEEcccccccHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccEEEcccHHHcc //