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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57090.1
DDBJ      :             putative 3-ketosteroid 5-isomerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.17.4
:123 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->123 1ocvA PDBj 3e-11 30.9 %
:RPS:PDB   1->122 1dmqA PDBj 2e-11 28.7 %
:RPS:SCOP  1->122 1c7hA  d.17.4.3 * 2e-11 28.7 %
:HMM:SCOP  1->120 1oh0A_ d.17.4.3 * 5.6e-24 30.8 %
:HMM:PFM   8->121 PF02136 * NTF2 1.6e-18 27.4 113/118  
:BLT:SWISS 6->122 SDIS_NOCSI 7e-26 61.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57090.1 GT:GENE BAD57090.1 GT:PRODUCT putative 3-ketosteroid 5-isomerase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2421120..2421491) GB:FROM 2421120 GB:TO 2421491 GB:DIRECTION - GB:PRODUCT putative 3-ketosteroid 5-isomerase GB:PROTEIN_ID BAD57090.1 LENGTH 123 SQ:AASEQ MASADDIRAAVRRYLDTVATGTAAEIAALYAEDATVEDPAGTPAHVGRAAIEKFYSALESTRRSTELLTVRVAGDSAAFAFRVVTETGDQRITIDPIDVMTFDEQARITSMRAYWSPDDITMG GT:EXON 1|1-123:0| BL:SWS:NREP 1 BL:SWS:REP 6->122|SDIS_NOCSI|7e-26|61.5|117/123| SEG 17->35|tvatgtaaeiaalyaedat| BL:PDB:NREP 1 BL:PDB:REP 1->123|1ocvA|3e-11|30.9|123/125| RP:PDB:NREP 1 RP:PDB:REP 1->122|1dmqA|2e-11|28.7|122/123| HM:PFM:NREP 1 HM:PFM:REP 8->121|PF02136|1.6e-18|27.4|113/118|NTF2| RP:SCP:NREP 1 RP:SCP:REP 1->122|1c7hA|2e-11|28.7|122/123|d.17.4.3| HM:SCP:REP 1->120|1oh0A_|5.6e-24|30.8|120/0|d.17.4.3|1/1|NTF2-like| OP:NHOMO 29 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- --------------122----1--11-----111112221----------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------111--------------------------------------------------------------------------------------------------------------------1------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 100.0 SQ:SECSTR cccHHHHHHHHHHHHHHHHHTcHHHHHTTEEEEEEEEccTTcccEEHHHHHHHHHHHHcccEEEEccccEEccccEEEEEEEEEEEETTEEEEEEEEEEEEEcTTccEEEEEEEccGGGEEcE PSIPRED cccHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEcccccccEEHHHHHHHHHHHHHccccEEEEEcccEEcccEEEEEEEEEEEccEEEEEEEEEEEEEcccccEEEEEHHccHHHEEEc //