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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57091.1
DDBJ      :             putative 3-ketosteroid 1-dehydrogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  190/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
b.38.5c.3.1d.168.1
:516 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   193->509 1jrzA PDBj 8e-23 30.7 %
:RPS:PDB   176->513 1e39A PDBj 1e-34 26.0 %
:RPS:SCOP  192->289 2f5tX1  b.38.5.1 * 9e-06 7.4 %
:RPS:SCOP  292->454 1d4cA3  d.168.1.1 * 4e-22 32.1 %
:HMM:SCOP  1->336 1rp0A1 c.3.1.6 * 5.1e-22 25.7 %
:HMM:SCOP  287->458 1qo8A3 d.168.1.1 * 2.7e-36 41.8 %
:RPS:PFM   194->497 PF00890 * FAD_binding_2 2e-16 44.0 %
:HMM:PFM   14->498 PF00890 * FAD_binding_2 3.7e-98 36.9 401/421  
:BLT:SWISS 33->516 3O1D_COMTE 1e-39 33.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57091.1 GT:GENE BAD57091.1 GT:PRODUCT putative 3-ketosteroid 1-dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2421519..2423069) GB:FROM 2421519 GB:TO 2423069 GB:DIRECTION - GB:PRODUCT putative 3-ketosteroid 1-dehydrogenase GB:PROTEIN_ID BAD57091.1 LENGTH 516 SQ:AASEQ MGGHTVVDWNDEVDVVVAGSGGGLAGAYTAAREGLSVAVVEATDKFGGTTAYSGGGGVWFPCNPVLRRAGTDDTIEDALTYYHAVVGDRTPRELQETYVRRGADLIEYLEQDEHFDFQMLPWPDYFGKAPKARLDGQRHIMPTPLPAAALGELREQLRGPLDTDRLGAPLPDLLIGGQALIGRFLLALSSFPHVRLYRETPLVELVVEDGAVIGAITERAGERFAIRARKGVVLAAGGFEQNDELRTQYGVPGQARDTMGPWGNLGKAHQAGIAAGADTDLMDQAWWSPGLTHPDGRSAFALWFTGGIFVDQHGERFVNESAPYDRIGRAIIERIESGAMTLPYWMIYDDKEGEVPPVKATNVSMVETAKYVEAGLWHTADTLPELAAKIGVPADALVATVERFNGFAAEGIDPEFGRGDEAYDRAFSQGESPLVAIDKGPFHAAAFGLSDLGTKGGLRTDTAARVLGRDGTPIPGLYAAGNTMAAVSGTVYPGGGNPIGASMLFSHLAVRDILGR GT:EXON 1|1-516:0| BL:SWS:NREP 1 BL:SWS:REP 33->516|3O1D_COMTE|1e-39|33.8|473/573| SEG 6->31|vvdwndevdvvvagsggglagaytaa| SEG 47->57|ggttaysgggg| BL:PDB:NREP 1 BL:PDB:REP 193->509|1jrzA|8e-23|30.7|290/568| RP:PDB:NREP 1 RP:PDB:REP 176->513|1e39A|1e-34|26.0|311/568| RP:PFM:NREP 1 RP:PFM:REP 194->497|PF00890|2e-16|44.0|225/375|FAD_binding_2| HM:PFM:NREP 1 HM:PFM:REP 14->498|PF00890|3.7e-98|36.9|401/421|FAD_binding_2| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| RP:SCP:NREP 2 RP:SCP:REP 192->289|2f5tX1|9e-06|7.4|81/92|b.38.5.1| RP:SCP:REP 292->454|1d4cA3|4e-22|32.1|137/146|d.168.1.1| HM:SCP:REP 1->336|1rp0A1|5.1e-22|25.7|230/0|c.3.1.6|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 287->458|1qo8A3|2.7e-36|41.8|146/146|d.168.1.1|1/1|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain| OP:NHOMO 632 OP:NHOMOORG 214 OP:PATTERN ------------------------------1------------------------------------- ----1---225---48822-27--5721222587776BA9-2-5----1-----2-----328----1-----------9iG2------------------------------------------------------11------1-------------------------------------1-------------------------1-----------1---111111------------------11--12-211214126611-1-11-1-111--------11-------------------------11---1112-96-2------------------24-2------HF-----1-------1---------------512------1---------------2--4--3-1-1-----------1411--11---1--1--------1--------------------------------------77--3543-1--21-1-------4------2-31432-----3--1-14--12-------------------1---1---1---------21162-1--21-2-----231-----------------1-------1------2-22431-6633344562672---------------22-11-----------------------------233321------------------------------------------------------------------------------------5-11-1-11--3443-----------------------1----------------------------------------------------------------------------- -------------1---1-111-----------111----------------48---1-------------------------------142-1211----2-------------------------------------------------------------2-------------1--1------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 483 STR:RPRED 93.6 SQ:SECSTR #################################TccEEEEccccccccTTGGGccccEEccccHHHHHTTccccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEEccTTcccccEEEccccccHHHHHHHHHHHHHHcGGGccHTTEEEEEcEEcHHHHHHHHHHHHHHHTTcEEEccEEEEEEEETTccEEEEEEEETTTEEEEEEEEEEEEcccccTTcHHHHHHHcGGGTTccccccTTcccHHHHHHHHTTccEEcTTcEEEEEEEETTTccccTHHHHTTcEEEcTTccccccTTccHHHHHHHHHTcGGGcEEHHHHHHTcGGGcEEEEEEHHHHHHcTHHHHHHHHTcccEEccHHHHHHHHTccHHHHHHHHHHHHHHHHTTccTTTcccccccccccEcccccccccccccEEEEEEEEEEEEEccEEEccTTcEEEcTTccEEEEEEEccTTEEcccTTcccTTHHcHHHHHHHHHHHHHHHHHH DISOP:02AL 1-4| PSIPRED ccccccccccccccEEEEccHHHHHHHHHHHHccccEEEEEEcccccccHHHHccHHHHccccHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccEEEcccccccccccHHHHccccccHHHHHHHccHHHccHHHHHHHHHHHHHHccccEEEEccEEEEEEEEccEEEEEEEEEccEEEEEEEccEEEEEEccccccHHHHHHHccccccccccccccccHHHHHHHHHHcccEEcccEEEEcccccccccccEEEcccccEEEEcccccccccccccHHHHHHHHHHHHcccccccEEEEEEcHHHHHHccccccccccccHHHHHHccEEEEcccHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccccccEEEEEEHHcEEEEcccEEEcccEEEEcccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcc //