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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57095.1
DDBJ      :             putative terminal oxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  177/915 : Eukaryota  40/199 : Viruses  0/175   --->[See Alignment]
b.33.1d.129.3
:395 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->385 2zylA PDBj e-136 61.0 %
:RPS:PDB   22->352 2ckfE PDBj 9e-30 14.5 %
:RPS:SCOP  17->145 1ww9A1  b.33.1.2 * 3e-19 22.0 %
:HMM:SCOP  9->147 2de6A1 b.33.1.2 * 2.1e-28 24.1 %
:HMM:SCOP  122->389 1z01A2 d.129.3.3 * 1.1e-31 19.6 %
:RPS:PFM   62->121 PF00355 * Rieske 5e-06 36.7 %
:HMM:PFM   37->123 PF00355 * Rieske 7.9e-17 25.9 85/97  
:BLT:SWISS 37->199 PAO_ARATH 4e-14 27.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57095.1 GT:GENE BAD57095.1 GT:PRODUCT putative terminal oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2426144..2427331) GB:FROM 2426144 GB:TO 2427331 GB:DIRECTION - GB:PRODUCT putative terminal oxygenase GB:PROTEIN_ID BAD57095.1 LENGTH 395 SQ:AASEQ MEVSMPGHSPNGRTAHEADEIRQIEAAPAPTRFARGWHCLGLLKSFQDGKPHEIKAFGTTLVVFQSETDGALHVLDAYCRHMGGNLADGTIKGDSIACPFHDWRWGGNGRCTGIPYARRVPPLARTRSWPTLERNGQLYIWHDPQGSKPTDEVTIPEIEGYGTPEWTDWTWNSMLIEGSHCREIVDNVVDMAHFFYVHYAFPRYFKNVFEGHVATQYMRSTPRHDVEVGTNYDDPNSTLRSDASYFGPSYMIDWLWSEANGMTIETVLINCHYPVTENSFVLQYGAMVKKPQGMSDEDADAMAAQFARGVEVGFEQDVAIWKNKAPIDNPLLSEEDGPVYQLRRWYKQFYVDVEDITEDMTKRFEFEIDTERAVASWEAEVADNIARGAVLDTTR GT:EXON 1|1-395:0| BL:SWS:NREP 1 BL:SWS:REP 37->199|PAO_ARATH|4e-14|27.3|161/537| BL:PDB:NREP 1 BL:PDB:REP 25->385|2zylA|e-136|61.0|356/359| RP:PDB:NREP 1 RP:PDB:REP 22->352|2ckfE|9e-30|14.5|330/433| RP:PFM:NREP 1 RP:PFM:REP 62->121|PF00355|5e-06|36.7|60/95|Rieske| HM:PFM:NREP 1 HM:PFM:REP 37->123|PF00355|7.9e-17|25.9|85/97|Rieske| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00355|IPR017941| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF00355|IPR017941| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00355|IPR017941| RP:SCP:NREP 1 RP:SCP:REP 17->145|1ww9A1|3e-19|22.0|127/142|b.33.1.2| HM:SCP:REP 9->147|2de6A1|2.1e-28|24.1|137/0|b.33.1.2|1/1|ISP domain| HM:SCP:REP 122->389|1z01A2|1.1e-31|19.6|240/0|d.129.3.3|1/1|Bet v1-like| OP:NHOMO 508 OP:NHOMOORG 217 OP:PATTERN -------------------------------------------------------------------- --1-2--1111---48411-15--351-111365655455-13-----------------112--1--21----------------------------------------------------------------------------122244---331-1-2-23-25553---1-----1----------1--------------1-------------------------1--------------------------------------------------------------------------------------------1--------------------------------------------------2111-------422---2--2-------------21-1132-----------------------3-----2--33333333-3332-1--------------------------------6O---11--3442532222233232333-13352733--111141--324133-2--------------------1---------------------------11-------------------------------------31--------1------1--------1-----------1---------------------------------1-----------------------1----------------------------------1--21---------------3323313-----2111-1-1-1111-1----------------------------21111-----------------------------------------------------1----2-2111-- -----------------------------------------------------------------------------------------------------------232411121---------------------------------------1--323223121111-111--121D111-43242-41------2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 388 STR:RPRED 98.2 SQ:SECSTR #######GcccccEEEcGGGcHHHHHHHHHHTTTTccEEEEEGGGcccTEEEEEEETTEEEEEEEcTETccEEEEEcccTTTccccccccEEcccEEcTTTccEEcTTccEEEcTTTTTTTTTccccEEEEEEETTEEEEEccTTcccHHHHHHHHHHTTTcccEEEEEEEEEEEEcccTHHHHHHHHHccTTHHHHTHHHHTccEEEEcTTccEEEEETTcGGGGccccHHHHHHHHHHHHHHHHHcHHHHHHHTcEEEEEEETTcEEEEEEEccTTcEEEEEEEEEETTccHHHHHHHHHHHHHHcTTcTTGGGGHHHHGcHHHHccEEEccTTTTcEEcccccccEEEEcccccHHHHHHHHHHHHHHHcHccHHHHHTTcTTTTTTcccTT DISOP:02AL 1-3, 5-25, 392-395| PSIPRED ccccccccccccccHHHHHHHHccccccccHHHHHccEEEEEHHHccccccEEEEEcccEEEEEEEccccEEEEEEccccccccEEEEEEEcccEEEEcccccEEcccccEEEcccHHcccccccccEEEEEEEccEEEEEEccccccccccccccHHHHHcccccEEEEEEEEEEEcccHHHHHHHcccHHcHHHHccHHccccHHHcccccccccEEccccccccEEEcccccccccEEEEEEEcccEEEEEcccccccccEEEEEEEEEEEEcccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHcccHHEEccHHHHHHHHHHHHHHHHHHHHHHccc //