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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57099.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  282/915 : Eukaryota  149/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:344 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->336 2j3hB PDBj 1e-37 30.7 %
:RPS:PDB   1->338 2dm6A PDBj 2e-25 25.6 %
:RPS:SCOP  4->151 1vj1A1  b.35.1.2 * 3e-19 25.7 %
:RPS:SCOP  128->306 1v3tA2  c.2.1.1 * 5e-15 27.9 %
:HMM:SCOP  2->158 1v3uA1 b.35.1.2 * 6.9e-30 42.4 %
:HMM:SCOP  129->307 1vj1A2 c.2.1.1 * 2.8e-38 38.0 %
:HMM:PFM   168->296 PF00107 * ADH_zinc_N 1.9e-21 26.6 124/130  
:BLT:SWISS 1->336 P1_ARATH 8e-38 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57099.1 GT:GENE BAD57099.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2429249..2430283) GB:FROM 2429249 GB:TO 2430283 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57099.1 LENGTH 344 SQ:AASEQ MPDINRRLVLARRPEGRVRPTDLELRTVALPDPGPGQALVRNTWLSIDPSVRIRFAATTPRGYLPPLREGEPLAGLALGEVVASRHPGFAVGDLVSHTLGYRDYAVVGADSATIGGYGAPTRIDTDGLPPQWFLGPLGSAGLTAYVGLTAILELRPADTLWVSAAAGAVGGLAAQLARLRGATVIGSAGGPAKVAFLRDELGIAAFDYRACPPAAALAELAPAGLDAYFDNVGGEHLTAALDAMRAEGRIALCGAVAEYDGAGAAGPGNLFQMVSKQLRMRGFRAGSFTDLEPAMRAEVAAHLRAGRLVHRETVFDGLERAADALCAMLAGETVGKTLCRLIPA GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 1->336|P1_ARATH|8e-38|30.7|326/345| SEG 164->182|aaagavgglaaqlarlrga| SEG 210->227|acppaaalaelapaglda| BL:PDB:NREP 1 BL:PDB:REP 1->336|2j3hB|1e-37|30.7|326/345| RP:PDB:NREP 1 RP:PDB:REP 1->338|2dm6A|2e-25|25.6|324/331| HM:PFM:NREP 1 HM:PFM:REP 168->296|PF00107|1.9e-21|26.6|124/130|ADH_zinc_N| RP:SCP:NREP 2 RP:SCP:REP 4->151|1vj1A1|3e-19|25.7|144/166|b.35.1.2| RP:SCP:REP 128->306|1v3tA2|5e-15|27.9|179/182|c.2.1.1| HM:SCP:REP 2->158|1v3uA1|6.9e-30|42.4|144/148|b.35.1.2|1/2|GroES-like| HM:SCP:REP 129->307|1vj1A2|2.8e-38|38.0|179/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 771 OP:NHOMOORG 436 OP:PATTERN ------------------------1111--1------------------------------------- --1-3--------1-11----1--3------111112274-1--1-11112-111111--21112113141--------------------------------1---------------------------------------------------------------112---------------------1-1-----------------1111-------11---------11111111111111121111--------------------------------------------------------------------------------------------------------------------------12112------1211---21222----------1-11111111-15-1--1----11----1511--1-11--1--------1-----21-------------------------------321------3222222333322213333124211211--111-3111112321--1----1----------------1---------------------11-121-----------------------------11-1--113121111112-111-1-11-11-------------11--111111-1---11-11111--1-11-1111111111121--1111111111-111111-111111--1--------------1-----------211-------------------1---21--23231222-21111111-------------1-----111111111111111------------------------------------------------------------1-- ----231-------212233222343311111111111111111112213346522122222122----1--3-1------2221122-6D3226111113-2362-1-5H2522231-1123223-413B2-21312-11113-111-111-2-221541411224-473-211---------1269K3C2--2-213 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 343 STR:RPRED 99.7 SQ:SECSTR cccEEEEEEEcccccccccGGGEEEEEEEcccccTTcEEEEEEEEEccTHHHHHTTTccTTcccccEEcccEEEEEEEEEEccTTccTTcEEEEccccccEEEEccTTEEEccTccEEEEGTccTTccGGGGGHTTTcHHHHHHHHHHHTTTccccccEEEEccTTcHHHHHHHHHHHHTTcEEEEEEccHHHHHHHHHTTccEEEETTcccHHHHHHHHcTTcEEEEEEcccHHHHHHHHTTEEEEEEEEEcccGGGTTTTTccccccHHHHHHTTcEEEEccGGccTHHHHHHHHHHHHHHHTTcccccEEEEEcGGGHHHHHHHHHTTccccEEEEEcEc# DISOP:02AL 344-345| PSIPRED ccHHHHHHHEEcccccccccccEEEEEEccccccccEEEEEEEEEEEcHHHHHHHcccccccccccccccccEEEEEEEEEEcccccccccccEEEEEcccccEEEEcHHHcEEcccccHHcccHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEcccccHHHHHHHHccccEEEEEEcccHHHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHccEEEEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEcHHHHHHHHHHHHccccccEEEEEEccc //