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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57101.1
DDBJ      :             putative flavocytochrome c
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  100/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:441 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->420 1qo8A PDBj 4e-25 30.7 %
:RPS:PDB   6->421 1d4cB PDBj 7e-25 24.2 %
:RPS:SCOP  6->253 1d4cA2  c.3.1.4 * 2e-11 22.3 %
:HMM:SCOP  1->437 1jnrA2 c.3.1.4 * 1.3e-33 30.1 %
:RPS:PFM   7->209 PF00890 * FAD_binding_2 2e-07 33.7 %
:HMM:PFM   7->420 PF00890 * FAD_binding_2 2.5e-40 32.0 362/421  
:BLT:SWISS 6->420 FRD2_SHEFN 1e-24 30.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57101.1 GT:GENE BAD57101.1 GT:PRODUCT putative flavocytochrome c GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2431137..2432462) GB:FROM 2431137 GB:TO 2432462 GB:DIRECTION - GB:PRODUCT putative flavocytochrome c GB:PROTEIN_ID BAD57101.1 LENGTH 441 SQ:AASEQ MSRIDTDVLVIGAGMAGLTTATRALDRGARVVVVEKAETVGGSALFAGYVWTAPDHAVMDRVNPGGDPELRRALVDGFADGVDWIRGLGVEVDEAVPVLGYGRGHRFDTHRYVEECRRRVRAAGTLLTGTETLALRTHDGAVTGASVRLPDGATREIEAGATVLATGGFQADPELVRAHIHPAAAAMPLRSNPTSAGDGLRLAESVGAATGTPGSGFYGHLVPTGVDFRDSGDFVALSLYYSEHALLFDLTNRRFTDETRGDHLTAMALLDRPEARGLLIADERVHRDWVLGSYVRGAVAVDKFDLTRTRGGRCGLAEDLDELAYLPAEWGYDGAEIAAQIRAVNAAGAAVRPGRANDPAPLDRGPYYVIETRPALTFPFHGIRIDATGRVRAATGGLVPGLFAAGSDIGGLYDHAYAGGIAPALVFGLAAADAAVPAAVA GT:EXON 1|1-441:0| BL:SWS:NREP 1 BL:SWS:REP 6->420|FRD2_SHEFN|1e-24|30.7|387/588| TM:NTM 2 TM:REGION 31->53| TM:REGION 418->440| SEG 121->137|raagtlltgtetlalrt| SEG 422->440|apalvfglaaadaavpaav| BL:PDB:NREP 1 BL:PDB:REP 6->420|1qo8A|4e-25|30.7|387/564| RP:PDB:NREP 1 RP:PDB:REP 6->421|1d4cB|7e-25|24.2|392/566| RP:PFM:NREP 1 RP:PFM:REP 7->209|PF00890|2e-07|33.7|193/375|FAD_binding_2| HM:PFM:NREP 1 HM:PFM:REP 7->420|PF00890|2.5e-40|32.0|362/421|FAD_binding_2| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| RP:SCP:NREP 1 RP:SCP:REP 6->253|1d4cA2|2e-11|22.3|247/322|c.3.1.4| HM:SCP:REP 1->437|1jnrA2|1.3e-33|30.1|269/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 174 OP:NHOMOORG 117 OP:PATTERN ------------------------------1------------------------------------- --------111--------------1-------1-12321-1-2----------1-------3---1------------1212------------------------------------------------------------------------------------------------------------------------------1--------------------1------------------11---1-11-21211-111----1-1---------------------------------------11---1112-22-1------------------11--------33-----1-------1---------------2-1----------------------2--2--2------------------1-------1--------------------------------------------------2---2321-------1-------3--------11111-----2-----1-------------------------------1---------1-11---------------------------------------------------1-----21----1-11111---------------21------------------------------------11------------------------------------------------------------------------------------2-11-1-11--1232-----------------------1----------------------------------------------------------------------------- ------1------------1--11111-----------------------113-11-----------------------------------1--1---------1--------------------------------------------------------------------------J------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 421 STR:RPRED 95.5 SQ:SECSTR ccEEEccEEEEcccHHHHHHHHHHHHHTccEEEEcccccccTTcEEccccHHHHHTTccccHHTcccHHHHHHHHHHHHHHHHHHHHTTccccEEEccTcTTcccccEEEcHHHHHHHTHHTcEEEccEEEEEEEEcccccEEEEEEEETTTEEEEEEccEEEEcccccTTTcHHHHHHHcGGGTTcEEcccTTcccHHHHHHHTTTccEEcEEcTTcEEEEEEEcTTTTTTcccccTHHHHTTcEEEcccccccccTTccHHHHHHHHHTcTTccEEEEEEHHHHHHcTHHHHHHHTTccEEEccHHHHHHHHTcHHcHHHHHHHHTccHHHHHHHHHHHHHHHHHTccccccccccccccccccEEEEEEEEEEEEEccEEEccTTcEEcTTTccEEEEEEEccTTEEcccTTcccTTH#################### PSIPRED cccccccEEEEcccHHHHHHHHHHHHccccEEEEEccccccccEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccHHHHHHHHHHHHHHccEEEEccEEEEEEEEccEEEEEEEEcccccEEEEEccEEEEccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccEEEEcccccccccccccEEEEEcccccEEEEcccccccccccccccHHHHHHHHcccccEEEEEcHHHHHHcccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEEEEEcccEEEccccEEEcccccccccEEEcHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcc //