[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57105.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  906/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.40.6c.37.1
:383 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   12->242 1g291 PDBj 1e-65 49.4 %
:RPS:PDB   5->241 3dmdC PDBj 4e-56 12.5 %
:RPS:SCOP  3->242 1b0uA  c.37.1.12 * 5e-52 34.3 %
:RPS:SCOP  214->368 1q12A1  b.40.6.3 * 1e-11 16.1 %
:HMM:SCOP  5->241 1g2912 c.37.1.12 * 2.4e-71 39.2 %
:HMM:SCOP  243->367 1oxsC1 b.40.6.3 * 1.4e-06 26.4 %
:RPS:PFM   44->169 PF00005 * ABC_tran 2e-21 46.2 %
:HMM:PFM   44->168 PF00005 * ABC_tran 1.3e-24 35.1 114/118  
:HMM:PFM   285->365 PF08402 * TOBE_2 1.2e-11 28.8 73/75  
:HMM:PFM   26->52 PF03215 * Rad17 1.7e-05 51.9 27/498  
:BLT:SWISS 3->296 UGPC_RALEH 2e-66 50.0 %
:PROS 141->155|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57105.1 GT:GENE BAD57105.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2436471..2437622 GB:FROM 2436471 GB:TO 2437622 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57105.1 LENGTH 383 SQ:AASEQ MTSQFTVSGLTKTYGSTLVVDHLDLEIAEGEFLVLLGPSGCGKTTTLRCLAGLETPQGGTMTFQDRTVFDAAARLNVPAHKRNIGMVFQSYALWPHMTVRQNIAYPLKVRKLKSALASGAVEQAADMVDCGALLDRYPAQLSGGQQQRVAVARGLVSRPDLVLFDEPLSNLDARLRDQVRTQIHRLHRELGFTAVFVTHDQAEAFALGDRLAIMKAGRIEQYDTPERVFENPVSEYVAAFIGMGNRLVLRRGHSGWETEAGDAVDLTHAVVRGAADEGEAAVARLRPEDLMLHATEADVPLGNVALHARLTGYEYGGRHYDVTVETAGADLALRAPAAEHGSALRNSEPGAPVLVSFSPASLRVFPGDAPAAARATVAAGEVR GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 3->296|UGPC_RALEH|2e-66|50.0|278/366| PROS 141->155|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 327->338|agadlalrapaa| SEG 369->379|apaaaratvaa| BL:PDB:NREP 1 BL:PDB:REP 12->242|1g291|1e-65|49.4|231/372| RP:PDB:NREP 1 RP:PDB:REP 5->241|3dmdC|4e-56|12.5|216/318| RP:PFM:NREP 1 RP:PFM:REP 44->169|PF00005|2e-21|46.2|119/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 44->168|PF00005|1.3e-24|35.1|114/118|ABC_tran| HM:PFM:REP 285->365|PF08402|1.2e-11|28.8|73/75|TOBE_2| HM:PFM:REP 26->52|PF03215|1.7e-05|51.9|27/498|Rad17| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 3->242|1b0uA|5e-52|34.3|239/258|c.37.1.12| RP:SCP:REP 214->368|1q12A1|1e-11|16.1|118/135|b.40.6.3| HM:SCP:REP 5->241|1g2912|2.4e-71|39.2|237/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 243->367|1oxsC1|1.4e-06|26.4|110/0|b.40.6.3|1/1|MOP-like| OP:NHOMO 50466 OP:NHOMOORG 1171 OP:PATTERN VVKCSPLJXWWTWSbQnJRUOSRY*PTmmcjaHAEEDEHGHFDVcQalNQ**j9TeSXYOSIJEY17A UdsR*fddqqtVaPXWXQP-PlDDZ*QQQQQOvttuz***Y*g****kyumT**zRTfDE***l*w****eaXXX*baWN*ilCCEABOPOI5NFIH--EERIKKcOcQQAA9999ABCDCCCCFWSMUZOPWWYVptu**MLL*ewnqxedngnVYOMQKPGhibj***eGSHLHGJSGKHGnbgSPvl7Wew********************w***hp***goyxyuuu**Vijkkkhfijiiiiiafbacxjcc**cPaXhvuPQ**ZUPXlldhitprrmkuurqotqpmmruorqbabaZbbcdcbab*kkedeljmii*x*********f*iq***Yeeb*mjso*dmTO**xnacfnRahZliPbafOfVWWMKNKJOgW***dWu****************-y**rn*u***TB**************JLO**********UTUUUUUU*fkOTng*55555555455688BB78AA7888A8696KEGHEG************************p********BP**s*q*ry******dsrPVLSpfJKKJJIJSSOaune**ThY*nZswfdtKcaXVVciXbfebfu*Z*KLJOFNONOKFDCDEDDEDDGTDHLTSrqvSxTdLVLyUSWVVNTdURSSUXZXUcc5-FLWRN3--222****a*y********zy-*zz**z*******vwzxvv*****gmgoplnnpppppmnpnnm*tprttrxV4************34JJCEBCDNNNNTN*r*dcZaXXJNPLMWPUhOQSQQFSHOWzg*************m***EECBBDDBEKgpo*rttts*****SSSNPONLNNEDDD64MVRRHIJJAA898999*BWDCFEA-BEDCGHBQPM9GLDHE889YjwTTq*qtoEbP 1122XSH-VG5ASeOHAFBBHKHLDNGHHCD9CLGHBGBDCEEBBAFEFNJEPIIKK79BDC6894862895CB6461336A99CC36-DIDAAD8A99B95CLFE3OkieVZSgffFFDDGRLtoAuB**i4jQiJJGCeCJaUDLEGBcCB*HVQQsIg*HqPTApVY*RaTGGLGE*AFBINuci*D*oKIvgslO ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 374-383| PSIPRED cccEEEEEEEEEEEccEEEEcccccEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEEccccccccccHHHccEEEEEEcccccccccHHHHHcccHHHccccHHHHHHHHHHHHHHcccHHHHHccHHHHcccHHHHHHHHHHHHccccEEEEEccHHHccHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHcccccEEEEEEEcccEEEEEcccccccccccccccccccEEEEEEcccEEEEEcccccccccccEEEEEEEEEEEcccEEEEEEEEcccEEEEEEEcccccccccccccccEEEEEEEHHHEEEEcccHHHHHcccccccccc //