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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57110.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  28/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:207 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->195 3dcfB PDBj 8e-14 29.9 %
:RPS:PDB   14->195 3br5E PDBj 1e-17 12.7 %
:RPS:SCOP  11->84 2g7sA1  a.4.1.9 * 3e-11 27.0 %
:RPS:SCOP  113->196 2genA2  a.121.1.1 * 3e-09 16.7 %
:HMM:SCOP  3->91 1t33A1 a.4.1.9 * 2.6e-15 34.1 %
:HMM:SCOP  86->203 1vi0A2 a.121.1.1 * 1.3e-13 29.1 %
:HMM:PFM   19->64 PF00440 * TetR_N 6.5e-15 43.5 46/47  
:HMM:PFM   78->149 PF06548 * Kinesin-related 0.0006 28.6 70/469  
:BLT:SWISS 13->179 FADR_BACSU 1e-05 27.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57110.1 GT:GENE BAD57110.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2441570..2442193) GB:FROM 2441570 GB:TO 2442193 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57110.1 LENGTH 207 SQ:AASEQ MTVDTEKRRESPRSKRATILAVAIEQFGRTGYEHTKWASIADEVGIGQTALYHYFESKAHCLLTIMRLELADSVARFDATTAEIEDPAEALRAAVSGALAATPSDALQRRILQNHMDLLAGERQSEKEEAERLRSRELVQEIESRWTALIARGIEAGVFVDDDPRTLGRLVLGMIVSVWRWYRPDGPLTLDQIIETVREAAVRVAAK GT:EXON 1|1-207:0| BL:SWS:NREP 1 BL:SWS:REP 13->179|FADR_BACSU|1e-05|27.0|148/194| SEG 88->101|aealraavsgalaa| SEG 197->206|vreaavrvaa| BL:PDB:NREP 1 BL:PDB:REP 15->195|3dcfB|8e-14|29.9|167/181| RP:PDB:NREP 1 RP:PDB:REP 14->195|3br5E|1e-17|12.7|173/186| HM:PFM:NREP 2 HM:PFM:REP 19->64|PF00440|6.5e-15|43.5|46/47|TetR_N| HM:PFM:REP 78->149|PF06548|0.0006|28.6|70/469|Kinesin-related| RP:SCP:NREP 2 RP:SCP:REP 11->84|2g7sA1|3e-11|27.0|74/74|a.4.1.9| RP:SCP:REP 113->196|2genA2|3e-09|16.7|84/118|a.121.1.1| HM:SCP:REP 3->91|1t33A1|2.6e-15|34.1|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 86->203|1vi0A2|1.3e-13|29.1|110/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 47 OP:NHOMOORG 29 OP:PATTERN -------------------------------------------------------------------- ----1--1-------------------------1114344-1-3---------1-1------2--21---------------1-------------------------------------------------------------------------------------------------------11-------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------1----222-----------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 196 STR:RPRED 94.7 SQ:SECSTR ccTcccccccHcHccHHHHHHHHHHHHHHHTTTcccHHHHHHHTTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHccccTTHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHH########### DISOP:02AL 1-18| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcc //