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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57112.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  117/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->222 2eerB PDBj 4e-16 28.0 %
:RPS:PDB   1->115 1a71A PDBj 2e-16 27.7 %
:RPS:SCOP  1->106 1bxzA1  b.35.1.2 * 6e-14 24.3 %
:HMM:SCOP  1->180 1m6hA1 b.35.1.2 * 3e-45 38.8 %
:HMM:SCOP  147->316 1d1tA2 c.2.1.1 * 2e-30 37.9 %
:RPS:PFM   27->94 PF08240 * ADH_N 2e-07 50.0 %
:HMM:PFM   26->140 PF08240 * ADH_N 5e-28 41.0 100/109  
:HMM:PFM   187->304 PF00107 * ADH_zinc_N 3.6e-18 34.2 117/130  
:HMM:PFM   116->238 PF00291 * PALP 0.00088 29.2 106/297  
:BLT:SWISS 1->222 ADH_SULTO 1e-15 28.0 %
:PROS 61->75|PS00059|ADH_ZINC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57112.1 GT:GENE BAD57112.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2443745..2444824) GB:FROM 2443745 GB:TO 2444824 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57112.1 LENGTH 359 SQ:AASEQ MLAVQLTAWGAEPEVRDVPMPRPRGEQVLVRVAAAGLCRSDLHVMDSPAGVFDYPLPVTLGHEVAGTVAEVGPDADPGWLGEPVVVHGVWSCGDCRNCRRERENYCLATRRRPDGRLAPLGNGLGHHGGLAEAMLVPSTRFLVRAHGVDPVAAAPLADAGATAYHAIREHLDLIDADTVVLVIGIGGLGHLAVQVLRDLGVRAIVAVDERAEARDLAVRLGARIALPDVESAAAELAAAGGADLVLDFAGAPATVAPAARTLAPGGRLVQVGSAGGRVEVGKDLGLAAGWRVAAPFWATRADLAAVLDAARRGALHSTTATFPLAEAPAVYRALRAGTITGRAVLIPPGLSPSSTRNRR GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 1->222|ADH_SULTO|1e-15|28.0|211/347| PROS 61->75|PS00059|ADH_ZINC|PDOC00058| SEG 95->104|crncrreren| SEG 117->135|laplgnglghhgglaeaml| SEG 147->163|gvdpvaaapladagata| SEG 179->189|vvlvigigglg| SEG 228->264|dvesaaaelaaaggadlvldfagapatvapaartlap| SEG 298->315|atradlaavldaarrgal| BL:PDB:NREP 1 BL:PDB:REP 1->222|2eerB|4e-16|28.0|211/347| RP:PDB:NREP 1 RP:PDB:REP 1->115|1a71A|2e-16|27.7|112/374| RP:PFM:NREP 1 RP:PFM:REP 27->94|PF08240|2e-07|50.0|62/108|ADH_N| HM:PFM:NREP 3 HM:PFM:REP 26->140|PF08240|5e-28|41.0|100/109|ADH_N| HM:PFM:REP 187->304|PF00107|3.6e-18|34.2|117/130|ADH_zinc_N| HM:PFM:REP 116->238|PF00291|0.00088|29.2|106/297|PALP| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| RP:SCP:NREP 1 RP:SCP:REP 1->106|1bxzA1|6e-14|24.3|103/178|b.35.1.2| HM:SCP:REP 1->180|1m6hA1|3e-45|38.8|178/198|b.35.1.2|1/1|GroES-like| HM:SCP:REP 147->316|1d1tA2|2e-30|37.9|169/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 249 OP:NHOMOORG 153 OP:PATTERN -------1333323311211-1--1-----1-----------------------------------1- ----3--------112211-12--1711111123444342-21232-1-11-1--1------3-2152242-----------1------------------1-----------------------------------22------11-11-----------------11--------------1-------2-----------------1---------------111111-----------------1---------------------------------------------------------------------------------------------------------------2------------2--1--1------24441-121221-----------------1----3---------------------1-11-----------111-----------------------------------12-1------1----121111----1111-----1212------1-1---------1-------------1-2---------------------1---1--1--1-------------------------------------------------------------------------------------------------------------1------------------------1------------------------------------------------------------1------------------1---------------------------------------------------------------------------------------------------- -----------------------2-1----------------------1-124311-----------------------------1---1------1---1----------------------------------3-------------------2------------------1----------1-----11------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 352 STR:RPRED 98.1 SQ:SECSTR EEEEEcccTTcccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHHTccTcccccccccccccEEEEEEEEcTTcccccTTcEEEEcccccccccHHHHcccccccTTcccccccGccccEEcTTTcccccccEEEEccGGGEEEcccccHHHHGGGGTHHHHHHHHHHHTcccTTcEEEEETTTcHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHTccEEEccHHHHHHHHTTTccEEEEEEccccHHHHTTGGGGEEEEEEEEEcccccccccccHHHHHHHTcEEEcccccHHHHHHHHHHHHTTcccccEEEEEcGGGHHHHHHHHHTTccccEEEEcTTcccc####### DISOP:02AL 351-359| PSIPRED cEEEEEEEccccEEEEEEccccccccEEEEEEEEEEEcccEEEEEEcccccccccccEEEcccEEEEEEEEcccccccccccEEEEcccccccccHHHccccccccccccccccccccccccccccccccEEEEEEcHHHEEEccccccHHHHHHHHccHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEcccHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHccEEEEEEEEccHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEcccccccHHHccc //