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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57127.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  248/915 : Eukaryota  118/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:693 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->683 3dwbA PDBj 4e-54 27.5 %
:RPS:PDB   49->691 3dwbA PDBj e-102 26.5 %
:RPS:SCOP  49->693 1dmtA  d.92.1.4 * e-130 25.2 %
:HMM:SCOP  49->693 1dmtA_ d.92.1.4 * 4.6e-192 39.0 %
:RPS:PFM   65->438 PF05649 * Peptidase_M13_N 1e-57 37.3 %
:RPS:PFM   492->683 PF01431 * Peptidase_M13 1e-25 37.2 %
:HMM:PFM   64->438 PF05649 * Peptidase_M13_N 1.1e-106 36.4 374/388  
:HMM:PFM   491->691 PF01431 * Peptidase_M13 2.1e-54 37.8 196/202  
:HMM:PFM   19->40 PF10518 * TAT_signal 2.2e-05 40.9 22/26  
:BLT:SWISS 54->683 ECE1_MOUSE 3e-56 27.6 %
:PROS 529->538|PS00142|ZINC_PROTEASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57127.1 GT:GENE BAD57127.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2456472..2458553 GB:FROM 2456472 GB:TO 2458553 GB:DIRECTION + GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD57127.1 LENGTH 693 SQ:AASEQ MTENGAAPGRRACGLRWDRRRFLTVGAAVPLAVTLASCAGEDAAAPTGTAGPDLTGVDPAVRPQDDLFRHVNGGWLRDYRLPPDKASHGTFEELADRTEDRLREILEAPDDAGPGTDARRLRDLYRAYLDTAAIEAAGTRPLADLLGEIDAAATKSDLARVAGALHALEVTGPVWLRVEPDRKDSTRHRPYLVQSGLGMPDEAYYREPVHSELRTAYRGYLTRIATAAGLPDPAGVAERVFDLETQLAAGHVDMVRWVDSLSSYHPWSWTELRDRAPGFDWDAWLDGLGGQRARFETVLVDQPEYPAALARLWEAEDAGRWREYLRLRLFDHYAPVLPAAFADAHFDWAERAQTGIQQPPPRWRAAVRFVRTKMGDALGREYAQRHFPTESKRQVEQLVEDLLAAYRQRLAEADWMSEQTRRTALAKVDKIVALIGYPDTWRDYSGLVVRPGELLASLRAVENHEFRHRLGRLDRPVDRREWTMLTPVEVNANYSWEINHIVFPAAILQPPFFDPAAAPAVNYGAIGVVIGHEIGHGFDTGGSRYDENGTLRDWWTSADKAAFETKTKAVIAQYDPLVPAGMPPDRRVNGALTVTENLADIRGVSTALAAYRIAAARAGAAEPDWRALFLSYARIWRHTATPEYTAATLGLDSHAPAEFRVNQVVRNMAEFHTAFEVRPGDGMYLAEHERVRL GT:EXON 1|1-693:0| BL:SWS:NREP 1 BL:SWS:REP 54->683|ECE1_MOUSE|3e-56|27.6|624/769| PROS 529->538|PS00142|ZINC_PROTEASE|PDOC00129| SEG 117->130|darrlrdlyrayld| SEG 510->520|ppffdpaaapa| SEG 524->537|gaigvvigheighg| SEG 607->627|alaayriaaaragaaepdwra| BL:PDB:NREP 1 BL:PDB:REP 54->683|3dwbA|4e-54|27.5|614/660| RP:PDB:NREP 1 RP:PDB:REP 49->691|3dwbA|e-102|26.5|627/660| RP:PFM:NREP 2 RP:PFM:REP 65->438|PF05649|1e-57|37.3|373/386|Peptidase_M13_N| RP:PFM:REP 492->683|PF01431|1e-25|37.2|188/205|Peptidase_M13| HM:PFM:NREP 3 HM:PFM:REP 64->438|PF05649|1.1e-106|36.4|374/388|Peptidase_M13_N| HM:PFM:REP 491->691|PF01431|2.1e-54|37.8|196/202|Peptidase_M13| HM:PFM:REP 19->40|PF10518|2.2e-05|40.9|22/26|TAT_signal| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF05649|IPR008753| GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF05649|IPR008753| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01431|IPR018497| GO:PFM GO:0006508|"GO:proteolysis"|PF01431|IPR018497| RP:SCP:NREP 1 RP:SCP:REP 49->693|1dmtA|e-130|25.2|639/697|d.92.1.4| HM:SCP:REP 49->693|1dmtA_|4.6e-192|39.0|639/696|d.92.1.4|1/1|Metalloproteases ("zincins"), catalytic domain| OP:NHOMO 1022 OP:NHOMOORG 372 OP:PATTERN --------------------------------------------1-11--11---------1------ 3551-11111111121-11-11111111111111112111-1-11111111111111111--11-------1111111----------1121-111---11111-2-1-2---------------------------------------------------------------------------------------------------------------1--------------------------------211221133311112211111112211111111111111111111111111111111112221112221----2-------2-2----------------------------------1--13112---------------1----------------------------------------112----------11111111-111--1-------------------------------1-111---------------------------------------2----------------2--------------1-----------------------111121-----------------------------11-2--2112-2333312233322323233---------------------------------------------------------------------------------------------------1-----1111-----111---1----1------1------------------------------1------------------44565663331111-------------------------1-111-1------21--1--------------2- --------------2--1111111-11111111-------------11--12122111-------------------------------111-11111111-1534--1-B776B576563687GI5A2QqD1C8G4554A568637463C22F677556CK67DD4A56M9CF31--17-------2-1--113333- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 645 STR:RPRED 93.1 SQ:SECSTR ################################################HHHHHHHHccTTccTTTcHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHHHTTHHHHHHHHHTTcccccccHHHHHHHHHHTcccccccEEEEEETTEEEEEEEEEEccccccccTHHHHTTTcccHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHcccGGGGccHHHHcEEEEHHHHHHHcTTccHHHHHHHHcTTcccTcEEEEccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHTHHHHccccccTccTHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHTTcTTccHHHHHHHHHHHHHcEEEEEccGGGGcHTTccccTTcHHHHHHHHHHHHHHHHHTTTTccccTTccccccTTccccEEETTTTEEEEEGGGccTTTccTTccHHHHHHTHHHHHHHHHHHTTcTTGGGccTTccccccccHHHHHHHHHHHHHHHHHHTTccHHHccccccccTTTTHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHTcEEEcHHHHHHHHHHcccccHHHHHHHHHHTcHHHHHHHTccTTcTTccccccccHT DISOP:02AL 1-8, 106-119, 618-619, 645-646| PSIPRED cccccccccHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEccccccccHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHcccHHHHcccccHHHHHHHcccccHHHHHHHHccccccccEEEEccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccccEEEEEcccccEEEEEHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHccccccccEEEEEEccccHHHHHHcccccccccccccccEEEc //