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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57133.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  902/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:319 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   5->238 1vplA PDBj 4e-25 30.8 %
:RPS:PDB   5->220 3b5jA PDBj 2e-39 21.5 %
:RPS:SCOP  4->225 1b0uA  c.37.1.12 * 8e-37 26.1 %
:HMM:SCOP  5->236 1g2912 c.37.1.12 * 1.3e-56 40.9 %
:RPS:PFM   45->165 PF00005 * ABC_tran 4e-10 36.8 %
:HMM:PFM   45->165 PF00005 * ABC_tran 7.8e-18 31.0 113/118  
:HMM:PFM   33->53 PF03215 * Rad17 0.00063 47.6 21/498  
:BLT:SWISS 5->319 DRRA_STRPE 6e-75 51.6 %
:PROS 137->151|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57133.1 GT:GENE BAD57133.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2462393..2463352) GB:FROM 2462393 GB:TO 2463352 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57133.1 LENGTH 319 SQ:AASEQ MNDDAVRAEGLRKRCGDKNALDGFDLTVRRGTVHGLLGPNGAGKTTAVRILSTLIRLDGGHATVAGLDVARRPAQVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGARRARQRADELLERFDLVAAADRGVGKYSGGMRRRLDLAASMILAPDVLFLDEPTTGLDPRSRGEVWEAVRALVADGTTVLLTTQYLEEADRLASRITVIDAGRAIADDTPDGLKNAVGGDLIEVVAAESADLPLVAKVVARVCTGEPDTHDAERRVYAPVTDRVAALTEVARTLQDEGVAVEDIGLRRPSLDDVFLHLTGHRTAAEEAA GT:EXON 1|1-319:0| BL:SWS:NREP 1 BL:SWS:REP 5->319|DRRA_STRPE|6e-75|51.6|310/330| PROS 137->151|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 5->238|1vplA|4e-25|30.8|234/238| RP:PDB:NREP 1 RP:PDB:REP 5->220|3b5jA|2e-39|21.5|214/243| RP:PFM:NREP 1 RP:PFM:REP 45->165|PF00005|4e-10|36.8|117/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 45->165|PF00005|7.8e-18|31.0|113/118|ABC_tran| HM:PFM:REP 33->53|PF03215|0.00063|47.6|21/498|Rad17| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 4->225|1b0uA|8e-37|26.1|222/258|c.37.1.12| HM:SCP:REP 5->236|1g2912|1.3e-56|40.9|232/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 42702 OP:NHOMOORG 1164 OP:PATTERN WWGCLMFGNOMKNJNLkBOOLPOZuQUhlWeSGACBD7EDCC8QYMXeJP*rd9LYLTVONEGCV185 QWuR*cagggjWaVYVXPP-PlBBb*PPPPPQvrst****W*c*u*zikgaO***SVgFF***m*u****fYVUUwZXTP*fk73968QPPL3LEIA--CDLGGKYIQOL477777766888888ROEMQJGNKWNloox*KKI*edXgraZeZcSTKEIHKFZaUhtsoSBJAEAABLAGA9iYdRQZT7Wdr********s********yyuw***Zou*ucmlopklh**TVXXYYXVXXWWVXWWWSTPnWYVvuUKSPVonKKxyUPQTaYSSSffhifelmjkjkiiegijhfiXWVVVXVXYYYWVqggVUTjikcc*k********zayZlussWceZ*iggZ*jfTJ**jfYcecQbdVbcKNUbJeYTTNDHEFJaX***WSr****************-or*ie*r***Q9**************IIO**********SSSSSSSSzeiNQla*54334444222366666655556666475HCDFCB************************r********9Jzyt*jvip******WfdIQDIfWFFHFGGGPMOWsjXx*NYVwiUjigcnGYYaQUWePYdebfx*V*8DGKAAAAAAB676776766BJ99HLKlfrKpURFOEgNPSSQKPVPNNNORVSRVS4-CLWMM------*s**R*qowvqptpunn-unnqunrppqvuqlmnllm*****aXQhidffigihgfeiefd*igfkljmO3z***********22FHDFCDFKLMLPKxg*SSQSQPEEEGEMLNSLMNNMGQDIMpatsrqw***p**xvl***ABB9BABABGTbZlegefgkskigVRQPPQPLNMDCDC23KPJIFGEF56555555iAF65767-8683A76666479745446RhbLLascgZ9cM -111VPD-OE6GKTIE8979GLFKFLLED5756CA96A8878966599BHBEKEDDB65778A38243155444827-7638776E-2-A8386529884416ECA1JnNWHMOSMOGEC7FIGdfAZDs*U3WJaDEGARFDQICEADDPCE*CPMHjDS*FSJZEtVS*QUSECLLC*AA9FGsaY*ArcFE*s**e ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 309-319| PSIPRED ccccEEEEEccEEEEccEEEEEccEEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHccHHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHcEEEEEEccEEEEEccHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccEEEEccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHcccHHHHccc //