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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57135.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:456 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   244->404 3ehjA PDBj 1e-11 19.9 %
:RPS:SCOP  344->452 1ys3A1  d.122.1.3 * 3e-05 15.1 %
:HMM:SCOP  322->452 1b3qA3 d.122.1.3 * 4.4e-12 27.7 %
:HMM:PFM   261->325 PF07730 * HisKA_3 8.4e-13 30.8 65/68  
:HMM:PFM   366->453 PF02518 * HATPase_c 3.2e-10 34.5 87/111  
:BLT:SWISS 261->404 YDFH_BACSU 5e-09 29.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57135.1 GT:GENE BAD57135.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2464373..2465743 GB:FROM 2464373 GB:TO 2465743 GB:DIRECTION + GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD57135.1 LENGTH 456 SQ:AASEQ MTETSTEPTLVLDRPVAPLPPPRRTVPAVLRAPVEARTWKELVYLVTAFALGCVAVCWVFFGIGGGLYLSVLVVGIPVLALVLLGGRVWGVIYRGLAEHLLDTTVPAPPEFAPPPGFLGFLRGAFTDRVSWRALLFLLAQAVVGVVLGYLVLTAVAVAVFTALSPIPWALFDPVNVDENGVARHSLMQFGSFYVDTWPRVLGVAAVGVLACFAVPWLVRGVCLLHRMLTVALLAETTRDRQLAELRESRRAAVEDAAATLRRVERDLHDGTQARLVTIAMALGRAEERLAAGGDARDLIADAHASSKEALTELRELVRGIHPPALELGLGPALETLTARCAVPVELRVHLPRRPSPAVEAIAYFSVAELLTNVVKHARAERAWVSVLPDSIRTLAVTVRDNGIGGVLPPAEGASSAGSGLAGLAARARAVDGSLTVASPLGGPTVVTIVLPLEDPQ GT:EXON 1|1-456:0| BL:SWS:NREP 1 BL:SWS:REP 261->404|YDFH_BACSU|5e-09|29.6|142/407| TM:NTM 4 TM:REGION 41->63| TM:REGION 69->91| TM:REGION 139->161| TM:REGION 206->228| SEG 62->75|giggglylsvlvvg| SEG 106->125|pappefapppgflgflrgaf| SEG 133->163|allfllaqavvgvvlgylvltavavavftal| SEG 200->210|vlgvaavgvla| SEG 322->338|ppalelglgpaletlta| SEG 412->429|gassagsglaglaarara| RP:PDB:NREP 1 RP:PDB:REP 244->404|3ehjA|1e-11|19.9|156/196| HM:PFM:NREP 2 HM:PFM:REP 261->325|PF07730|8.4e-13|30.8|65/68|HisKA_3| HM:PFM:REP 366->453|PF02518|3.2e-10|34.5|87/111|HATPase_c| RP:SCP:NREP 1 RP:SCP:REP 344->452|1ys3A1|3e-05|15.1|106/137|d.122.1.3| HM:SCP:REP 322->452|1b3qA3|4.4e-12|27.7|130/185|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 69 OP:NHOMOORG 33 OP:PATTERN -------------------------------------------------------------------- ----71------1-1------2---4------411111-1-4-32112-11---11-1--12--4-15551---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 213 STR:RPRED 46.7 SQ:SECSTR #############################################################################################################################################################################################################################################HHHHHTcHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccHHHHHHHHHHHHHHTTcEEcccccccccccHHHHHHHHHHHHHHHHHHHHHTcccEEEEEEEEccccEEEEEEEEcccc###cccccccTTcccHHHHHHHHHHTTcEEEEEccccEEEEEEEEEccc### DISOP:02AL 1-5, 409-416, 455-456| PSIPRED ccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHccEEEEEEccccEEEEEEEEcccccc //