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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57146.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  95/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:180 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->159 2gmyD PDBj 3e-09 30.9 %
:RPS:PDB   6->164 3c1lB PDBj 5e-12 13.5 %
:RPS:SCOP  12->164 2oyoA1  a.152.1.3 * 5e-17 20.9 %
:HMM:SCOP  22->165 2o4dA1 a.152.1.3 * 5.4e-30 39.3 %
:HMM:PFM   42->114 PF02627 * CMD 4e-11 28.8 73/85  
:HMM:PFM   113->162 PF11159 * DUF2939 0.00043 26.5 49/95  
:BLT:SWISS 18->177 YNJA_ECOLI 1e-11 28.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57146.1 GT:GENE BAD57146.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2473911..2474453 GB:FROM 2473911 GB:TO 2474453 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57146.1 LENGTH 180 SQ:AASEQ MRALRRIRNYAQAMRQARRHRGDLVGWLARRPQLGAGTAFYESMLLFSNRLDPHLKELAELKTAGLINCEFCLDIGSALAHSSGVTEQQITDLPRYRTSPAYSELERLVIAYAEAMTATPAVDLADLREQLLAHLSKAQLAELAATIAWENQRARLNQGLGVRPTGMAEGLACALPEPAR GT:EXON 1|1-180:0| BL:SWS:NREP 1 BL:SWS:REP 18->177|YNJA_ECOLI|1e-11|28.4|155/182| BL:PDB:NREP 1 BL:PDB:REP 48->159|2gmyD|3e-09|30.9|110/145| RP:PDB:NREP 1 RP:PDB:REP 6->164|3c1lB|5e-12|13.5|155/177| HM:PFM:NREP 2 HM:PFM:REP 42->114|PF02627|4e-11|28.8|73/85|CMD| HM:PFM:REP 113->162|PF11159|0.00043|26.5|49/95|DUF2939| RP:SCP:NREP 1 RP:SCP:REP 12->164|2oyoA1|5e-17|20.9|153/186|a.152.1.3| HM:SCP:REP 22->165|2o4dA1|5.4e-30|39.3|140/0|a.152.1.3|1/1|AhpD-like| OP:NHOMO 124 OP:NHOMOORG 95 OP:PATTERN -------------------------------------------------------------------- --------------13311-12--3-1111-111111123-----2----------------2----1--------------1------------------1-------1----------------------------------1---------------------2----------------1---------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1------------------------------------------------------------------1-1------------------1------------------------------------------------1------------------------------21---------------------------1-----1-------1---11-1222122211-2111222121222111111111----------------------1121111-----------------------1111--------------------11111--------------------1----------------1----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 159 STR:RPRED 88.3 SQ:SECSTR #####HHHHHHHHHHHHHccccHHHHHTTTcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHccHHHHHHHcGGGGcccccHHHHHHHHHHHHHHcGGGccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHTccc################ DISOP:02AL 1-4, 179-180| PSIPRED ccHHHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc //