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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57157.1
DDBJ      :             putative lipase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:385 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   182->247 3d2cA PDBj 5e-11 43.9 %
:RPS:PDB   127->245 3ds8A PDBj 2e-08 14.4 %
:RPS:SCOP  122->251 1cvlA  c.69.1.18 * 2e-12 27.4 %
:HMM:SCOP  120->352 1ku0A_ c.69.1.18 * 1.2e-23 19.0 %
:RPS:PFM   125->326 PF01674 * Lipase_2 4e-20 44.8 %
:HMM:PFM   126->314 PF01674 * Lipase_2 3.1e-14 22.8 171/219  
:BLT:SWISS 109->243 ESTB_BACSU 5e-14 42.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57157.1 GT:GENE BAD57157.1 GT:PRODUCT putative lipase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2483634..2484791) GB:FROM 2483634 GB:TO 2484791 GB:DIRECTION - GB:PRODUCT putative lipase GB:PROTEIN_ID BAD57157.1 LENGTH 385 SQ:AASEQ MVTVSVLAVTVSGSPAHADPDAGTSVSEQALAAIIAEGRTLAPTAGGTGSACTSGSGAGSGNGSGNCYGGSGSSSGSAGGYASDTVGHGPEMSSWLAAFGYGLGNPDVAPPGANDWNCKPTAEHPRPVVLLHGTWMNAYNGFAYMSQPIKDAGFCTFTLNYGRSNLLEGGGLGSVLPGVMGTGYIQDSAKQVATFVDRVLAATGADEVDIIAHSQGGALANWYTKYEGGADKVKNLITYGATHHGTTLVGIGALGRAINNFGIDVLGFVEIFVGHAGIQQTVGSDFINKLNENGDTIAGVDYTVVGTRYDEITNPYELTFLQAVPGATVQNITLQDGCEQDMSDHLTMMYSPRGLSIALRALDPEGHPDLVCTGNPWLLGGGGSL GT:EXON 1|1-385:0| BL:SWS:NREP 1 BL:SWS:REP 109->243|ESTB_BACSU|5e-14|42.6|115/210| SEG 45->83|aggtgsactsgsgagsgngsgncyggsgsssgsaggyas| BL:PDB:NREP 1 BL:PDB:REP 182->247|3d2cA|5e-11|43.9|66/179| RP:PDB:NREP 1 RP:PDB:REP 127->245|3ds8A|2e-08|14.4|118/245| RP:PFM:NREP 1 RP:PFM:REP 125->326|PF01674|4e-20|44.8|183/188|Lipase_2| HM:PFM:NREP 1 HM:PFM:REP 126->314|PF01674|3.1e-14|22.8|171/219|Lipase_2| RP:SCP:NREP 1 RP:SCP:REP 122->251|1cvlA|2e-12|27.4|113/316|c.69.1.18| HM:SCP:REP 120->352|1ku0A_|1.2e-23|19.0|200/0|c.69.1.18|1/1|alpha/beta-Hydrolases| OP:NHOMO 69 OP:NHOMOORG 37 OP:PATTERN -------------------------------------------------------------------- ----221222243-2-----------------1---2475---2---------11-----22121-2121------------1---------------------------------------------------------------------------------------1-------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------ ---------------1---1---111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 59.5 SQ:SECSTR ######################################################################################HHHHHHHHHHHHcccHHHHHHHHHHHcHHcEEEGGGcccEcEEEEccTTccTTTTTHHHHHHHTTcccccEEEEEETTTEEEEEccccTTccccEEEEEEccTTccHHHHHHHHHHHHcccEEEEEETHHHHHHHHHHHHcTTccEEEEEEEEcccTTcTcccccccccTTcccEEEEEEETTcccccccccHHHHHcHHHHHHHHTTTTcccccEEEEEcTTcccccc###################################################################### DISOP:02AL 70-85| PSIPRED cEEEEEEEEEEccccccccccccccHHHHHHHHHHHcccEEccccccccccccccccccccccccEEEccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHcccHHHHccEEEEcccccccccccccHHHHccccHHHHHHHHHHHHcccHHHHHHccHHHHHHHHcccccccccEEEEEEEccccEEcccccEEEcccccccEEEEEEEEEccccccccHHHcccHHHHHHHHHHHccccccccccEEccEEEEccccc //