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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57172.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  904/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:246 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   19->203 2nq2D PDBj 2e-28 39.8 %
:RPS:PDB   5->226 3dmdC PDBj 2e-34 15.7 %
:RPS:SCOP  5->227 1b0uA  c.37.1.12 * 2e-33 29.7 %
:HMM:SCOP  7->212 1ii8.1 c.37.1.12 * 1.9e-56 38.9 %
:RPS:PFM   44->159 PF00005 * ABC_tran 3e-11 39.3 %
:HMM:PFM   44->159 PF00005 * ABC_tran 8.2e-21 36.5 104/118  
:HMM:PFM   31->55 PF02463 * SMC_N 1.4e-06 56.0 25/220  
:BLT:SWISS 9->227 ZNUC_SILPO 5e-33 38.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57172.1 GT:GENE BAD57172.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2495639..2496379) GB:FROM 2495639 GB:TO 2496379 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57172.1 LENGTH 246 SQ:AASEQ MAAGLRIHGLTAGYRGRIALHDLTADLPGGAVTAVLGPNGSGKSTLLAAVAGVLRPAAGRVERGPGRRLAFVVQHSAVPATLPITVAETVAMGRWSHRGPWRRLTRADTAIVDACLDRLDLTELTGRRLDTLSGGQRQRTLLAQAMAQRADILLLDEPTVGLDAHSRRIIADLLVELAADGATIVQATHHPDEALAATHCLLLEAGHLRAQGDPASILGGPAAQLFGHEGVSFDRNALARQSIGLR GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 9->227|ZNUC_SILPO|5e-33|38.9|208/256| BL:PDB:NREP 1 BL:PDB:REP 19->203|2nq2D|2e-28|39.8|181/248| RP:PDB:NREP 1 RP:PDB:REP 5->226|3dmdC|2e-34|15.7|210/318| RP:PFM:NREP 1 RP:PFM:REP 44->159|PF00005|3e-11|39.3|112/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 44->159|PF00005|8.2e-21|36.5|104/118|ABC_tran| HM:PFM:REP 31->55|PF02463|1.4e-06|56.0|25/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 5->227|1b0uA|2e-33|29.7|219/258|c.37.1.12| HM:SCP:REP 7->212|1ii8.1|1.9e-56|38.9|203/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 33454 OP:NHOMOORG 1168 OP:PATTERN IHE7AF7CEEDBGEFDV8FGFMJIfHLTTOUN847A8587A67OZJRbIIqcP6CIDILDB9CAM155 HOfH*ZXZddeVWSROPKK-Kh88R*LLLLLKkgiiq***MvT*mxiZpdXLmmiMRW9Cmsvk*ns***YPQPPjQNJLnSY52537GEEC3H8B8--58J89DLCNKG55444454645555ACHABG59GEIDVXYmpAAEjRXNXaONTSXNQICIEHDYPOWgegFBIC9BBBL9989dSUKJED3RPXjjjjkloqTppllhsjYZZXfmmlOYbnVSZXYZTXU**GKKKLKJHKKKKKKKGGFHIRMMIbcGIIGJfdGHfhKFDLOKKNNRQSVSTVcXYXWVYTVWXVVXLLMLKLMMMMLKLfWUOOOWUXOEYVQdWWWYXaXIWLNNSSGJIHbNPOAyQPNG**NRONJIIVOJHDDFCZAWTQQJBECEDRR***PPb*z**vprnrqktlmk*-go*ga*g***R7**************BDIu*******u*NMNNNNNNhWXHJWTs44323333113311442221121134343689C7Bm**uy******tusup*****wzzg****vz*t7EnqdsaiYd*m****TbYENAFcPDEGFFDFKIIQZYKg*LSMbXVdcWVWESNSNOMSPKWSRVgsQh8ABG47778862311222234I578MLYcgIlKKDJDdKKNNKCGRLJJNMIQOMPO5-AEPOF-1-111*n**Sxjhnnniomogh-mggglilhninokefggfc*****WTTdbacadddddacdccb*cYbddegN2pvxyzyyvuzzz23DC79788CDFDLFlf*PPOSPMBHJHEHCCPHGIHGAHEIKkVmlhkjyw*lwtojbz**789797A98IPTSkWYXXYdfeWWJPLKJLKHJIAAAA24GDII67891--21111TBB55622-2121554443534543335AMHEBGUHKI8SJ -144SLD-QG88HLLDDE9BHMCIIHDDC9A8AJIF9A8A9AA888DAKLHFKGACE6CEEBD7546715737464515544334554-HH8DFFE989ED3DEFC1PyKiQSNhVmFCBBHOGbdBk7**b1dSgDGB5TCIhY6FAC8R98*8RJNaJd*IeKYAtYa*HUaJIIDI*FHDJJqbc*AzlEGzl*tW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 240-246| PSIPRED cccEEEEEEEEEEEccEEEEEccEEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEccccEEEEcccccccccccHHHHHHHHHccHHHHcccccccHHHHHHHHHHHHHccHHHHHccccHHcccHHHHHHHHHHHHHccccEEEEEccHHHccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHEEccccEEEEEccHHHHHHHHHHHHHcccccccccccccccccccc //