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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57173.1
DDBJ      :             putative ABC transporter
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  417/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.69.10b.69.2f.22.1
:660 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  322->517 1jmxB  b.69.2.2 * 5e-06 14.5 %
:HMM:SCOP  2->260 1l7vA_ f.22.1.1 * 1.8e-28 27.6 %
:HMM:SCOP  323->656 1jofA_ b.69.10.1 * 1.9e-06 21.9 %
:RPS:PFM   12->242 PF00950 * ABC-3 8e-33 33.8 %
:HMM:PFM   11->264 PF00950 * ABC-3 5.2e-62 37.0 254/258  
:BLT:SWISS 2->241 P29K_STRGN 6e-24 26.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57173.1 GT:GENE BAD57173.1 GT:PRODUCT putative ABC transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2496439..2498421 GB:FROM 2496439 GB:TO 2498421 GB:DIRECTION + GB:PRODUCT putative ABC transporter GB:PROTEIN_ID BAD57173.1 LENGTH 660 SQ:AASEQ MEWLLAPFEVSFVHRALCGGLLVSCLCAIAGTWVVVRGMAFLSDAMAHGMLPGIAVAALLGGNLVLGAAVSAAAMALGVSALTRSPRFSADIGIGLLFVGMLAIGVVIISRAQSFAVDLTGFLFGDVLAIRDRDLAFLATALLLAGIVAALGHRAFVALAFDPRLAHTLGLRPRLAQAAMLGLITLAIVASFHVVGTLLVFGLLIAPPAAATLWAHRIPVIMALAALLGASATVAGLLISWHAGTAAGATIAVVAVALFFLSAAASAARSWWRGRRARAAAATVAVAAVLTGCAANPEPVQPEPTPHGYIAGAEETAEPQPRLVLADSGSGAVRVLDLVSEQVTELPAVPGVRGIAADGRHAYLSDGTALRIVDTGSWLVDHGDHTHYYRAPIREVGTRPVTGDTTVLADRAVAAVHTGAETVLLDRGALDDGSVRALGEPIAGTAVPYAEHLVIARPDGRVEVRTRDGAPVTTLPQPCPEPRGSASTRRGVVFGCADGALVVHADGTAFTGTPIAYPHPVPATERATEFRHRPGSATLAARAGDRGAWLLDVRARTWTLVPAGPVLAANTAGEGAPLLTLTADGMLHAHDPVTGVELAGTQLLATVDPAAAPTVTVDSARAYVNDPAGRRVFEIDYANLRVARTFPLDIAPALMVETGE GT:EXON 1|1-660:0| BL:SWS:NREP 1 BL:SWS:REP 2->241|P29K_STRGN|6e-24|26.4|239/278| TM:NTM 8 TM:REGION 13->35| TM:REGION 56->78| TM:REGION 98->120| TM:REGION 139->161| TM:REGION 183->205| TM:REGION 218->240| TM:REGION 246->268| TM:REGION 278->297| SEG 55->82|avaallggnlvlgaavsaaamalgvsal| SEG 135->151|laflatalllagivaal| SEG 243->295|agtaagatiavvavalfflsaaasaarswwrgrraraaaatvavaavltgcaa| SEG 605->618|atvdpaaaptvtvd| RP:PFM:NREP 1 RP:PFM:REP 12->242|PF00950|8e-33|33.8|231/257|ABC-3| HM:PFM:NREP 1 HM:PFM:REP 11->264|PF00950|5.2e-62|37.0|254/258|ABC-3| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00950|IPR001626| GO:PFM GO:0006810|"GO:transport"|PF00950|IPR001626| GO:PFM GO:0016020|"GO:membrane"|PF00950|IPR001626| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00950|IPR001626| RP:SCP:NREP 1 RP:SCP:REP 322->517|1jmxB|5e-06|14.5|193/339|b.69.2.2| HM:SCP:REP 2->260|1l7vA_|1.8e-28|27.6|254/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| HM:SCP:REP 323->656|1jofA_|1.9e-06|21.9|242/0|b.69.10.1|1/1|3-carboxy-cis,cis-mucoante lactonizing enzyme| OP:NHOMO 621 OP:NHOMOORG 425 OP:PATTERN -----------------------1----------1--------1--1-21--1--------------2 -----11-222212-------2----------22222133----112--2--3221111111-12-1-3-1-------1---1---1-1111-111----------------------1-111111111---1--1233211114113221121122211111221211-1111111111111111------1-11111--121---1-221111-1-11--12122222221211222222211122122122---11-----11--111---1-11111111111111111111111111111111111111--111---1-1-----------------1-------11--1-2211-111--------1-------23332--1111111113111111111112---------11-124412132213313---2-21111---------------1--3-------------------------------------------------------------------------------1-1-1--1-----111111-1--11-----111--1-1111-1-1---11-------1111131111111-1--------11-1--111-1---------------------------2-22-------5-13-13---1-122-------2-1-1--21------111342222221222222222212411111113-322222222222-13------------21-333131333333223-----------------1-2-----1122----------2112-----11111-------------------------------------------------------------1----1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 295-317| PSIPRED cHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcHHHHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEccccEEEEEEcccccccccccccccccccccccEEEEEEccEEEEEEEccccccccccHHHHHHcEEEEEcccccccEEEEEcccEEEEccccEEEEEccccccccEEEEccccccEEEEEHHcEEEEEEcccEEEEEcccccccccccccccccccccccccEEEEEEEccEEEEEccccEEEEEEccccccccccccEEEEccccccHHHHHHHHHcEEEEEEEccccEEEcccHHHHHHHHccccEEEEEEEcccEEEEEEccccEEEEEEcccccccHHHccEEEEEccEEEEEcccccEEEEEEEccccEEEEEEccccccHHEEEcc //