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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57177.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  65/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->308 1rhcA PDBj 1e-29 27.2 %
:RPS:PDB   1->318 3c8nC PDBj 8e-39 29.9 %
:RPS:SCOP  3->308 1rhcA  c.1.16.3 * 8e-33 26.6 %
:HMM:SCOP  1->318 1rhcA_ c.1.16.3 * 5.1e-72 31.1 %
:RPS:PFM   17->153 PF00296 * Bac_luciferase 7e-10 39.0 %
:HMM:PFM   12->291 PF00296 * Bac_luciferase 1.8e-64 33.0 270/307  
:BLT:SWISS 24->167 MER_ARCFU 2e-12 34.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57177.1 GT:GENE BAD57177.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2502459..2503442) GB:FROM 2502459 GB:TO 2503442 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57177.1 LENGTH 327 SQ:AASEQ MPIGYKLAAEGYGPNDLIRQAVAAEQAGFDFVEISDHFHPWLDNQGHSPFAWSVLGAIAARTERIGLATGVTCPTLRYHPAIVAQAAATTALISDGRFTLGIGSGERLNEHVVGLEFPDSVRVRHEMLREALEIIRLLWQGGYRSYEGKYLQLSDARIFDLPETPPVIAVAAGGPAAARLAADLGDGLFATEPNAEIVREYHEHGGSGPRYAEVPVAWAPDEHTAAQAALETTRWALAGWKVMSELPNPVNFAAASATVREDDIRAHFTCGTDPDRYVEAVRTFTDAGFDHLVLQNAGPDPYGFIDFYGSRLRETLRESTALTAHRG GT:EXON 1|1-327:0| BL:SWS:NREP 1 BL:SWS:REP 24->167|MER_ARCFU|2e-12|34.9|129/332| SEG 81->91|aivaqaaatta| SEG 169->190|avaaggpaaarlaadlgdglfa| BL:PDB:NREP 1 BL:PDB:REP 3->308|1rhcA|1e-29|27.2|305/330| RP:PDB:NREP 1 RP:PDB:REP 1->318|3c8nC|8e-39|29.9|311/324| RP:PFM:NREP 1 RP:PFM:REP 17->153|PF00296|7e-10|39.0|123/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 12->291|PF00296|1.8e-64|33.0|270/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 3->308|1rhcA|8e-33|26.6|304/330|c.1.16.3| HM:SCP:REP 1->318|1rhcA_|5.1e-72|31.1|315/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 187 OP:NHOMOORG 74 OP:PATTERN -----------------------21--1--------1---------3----12-------------11 ----9---------57722-25111422222246665597-21336--2-----1-----331-2321222-----------5----------------------1-1----------------------------11111----2-------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111--------1----1-11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 327 STR:RPRED 100.0 SQ:SECSTR cEEEEEEcTTTccHHHHHHHHHHHHHHTTcEEEEcccccccccTTcccccHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHcTTcEEEEEccccHHHHHHTcccccccHHHHHHHHHHHHHHHHHHTTcccEEEEccccEEEEEccccccTTcccEEEEcccHHHHHHHHHHccEEEEEccccHHHHHHHHHTTccGGGEEEEEEEcccHHHHHTTGGGGGGGccHHHHHHHHcccHHHHHHHHTccHHHHHGGGcEEEccHHHHHHHHHHHHHTTccEEEEEcccccHHHHHHHHHHTHHHHHHcTcccccccc DISOP:02AL 319-327| PSIPRED cEEEEEcccccccHHHHHHHHHHHHHccccEEEEEHHcccccccccccccHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEccccEEccccccccEEEEEcccHHHHHHHHHHccccccccccHHHHHHHHHHHccccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHccEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHcccccccccc //