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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57192.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  874/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->259 1rwbA PDBj 4e-26 35.0 %
:RPS:PDB   17->259 1dohB PDBj 1e-29 22.9 %
:RPS:SCOP  18->260 1pwxA  c.2.1.2 * 3e-31 18.8 %
:HMM:SCOP  11->256 1zemA1 c.2.1.2 * 4.5e-74 42.8 %
:RPS:PFM   18->184 PF00106 * adh_short 6e-14 34.5 %
:HMM:PFM   18->185 PF00106 * adh_short 2.5e-33 30.1 163/167  
:BLT:SWISS 18->263 YOHF_ECOLI 9e-51 42.4 %
:PROS 154->182|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57192.1 GT:GENE BAD57192.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2511029..2511859 GB:FROM 2511029 GB:TO 2511859 GB:DIRECTION + GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID BAD57192.1 LENGTH 276 SQ:AASEQ MPTIAPLPHERTGAPLRAVVTGSDSGIGKAVAVALAAGGGVDVGVTYHRDAEGAERTAEQVRERGASAAVRQLDLTDLPTAAAVIDDIAEELGGLDLLVNCAGTGSAEKVMDMDFDTWRRVLSVDLDGAFLCAQRAAKHMIRGGRGGRIINITSVHEHAPKVGAAPYCAAKAGLGALTKVLALELAEYDITVNSVAPGEISTPMTGQEDVDPREQPRPGVPLGRPGHAEEVAAVVAFLATPAAGYVTGASFVVDGGMLLMGPQASSMLPDERWREV GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 18->263|YOHF_ECOLI|9e-51|42.4|245/253| PROS 154->182|PS00061|ADH_SHORT|PDOC00060| SEG 28->45|gkavavalaagggvdvgv| SEG 141->150|irggrggrii| SEG 228->243|aeevaavvaflatpaa| BL:PDB:NREP 1 BL:PDB:REP 19->259|1rwbA|4e-26|35.0|240/261| RP:PDB:NREP 1 RP:PDB:REP 17->259|1dohB|1e-29|22.9|240/271| RP:PFM:NREP 1 RP:PFM:REP 18->184|PF00106|6e-14|34.5|165/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 18->185|PF00106|2.5e-33|30.1|163/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 18->260|1pwxA|3e-31|18.8|234/252|c.2.1.2| HM:SCP:REP 11->256|1zemA1|4.5e-74|42.8|243/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 9636 OP:NHOMOORG 1103 OP:PATTERN 111-222475756544-613---1622715591----------11121--421-11----22633-32 BCL4P1-433A261XlcGG-Gh44XyGFGGGQituvcm**4Q8uFHA43A63IDF53611ADO2BDPQONC11111111175Q11112454412111--428268K4L2B11111111111111255354423355BAAFE222CA379853443331114322438A8H2111111111111D9578551F4HAABABDDDCCEBCECHBIIDGBAC9FGGFB8444444CP5444443344444438888961814316-1-344434234466334434233322222222222222343343444444412211122244356933333334356555257563311862227612331433333552282AZCCN11111E5rUU669RIONJGHIHFGIHIIL-DELCCZDIOYR1eVVHQNVmgbedLT8C9F8OHAHJB9E66666666LJH94899111111111112223312211221211116CYkF5DYRISnXahhhGHGHGWWfeJJJJ8IwQjMqbR48HIGH8DCCLERCXV7875534951111111226JB53I54311111322313643B42838657DH3411111111121121111111112116678869D97H826665748A676584856581-2334711-11199D95D5AAABA999AA-A9ABA79ABAA8A99AA99CJFB74799679989989978799I787765831766666666666111534232877839EJC1116161111112429ACBA3A356J7KKGJEJIUEFEIHFIFF4121131112334B5455489578EGDADA989964541132666555--------1-3--------1-1------1-------3232155565282 11--446-2-2-18ANOIGPJNIbSZNAA5656BDB5E9C7BC767CEDKKRgWAEE8A89A64A12416--546111-11446A713-5JAO6M73545566986-394bBG9981311-24242-4-873-2552222532651531431-53645CDCB4HF9774887BB93352X121298B9JHE555D6856 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 276 STR:RPRED 100.0 SQ:SECSTR cccccccccccGGGGcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHcHHcTTcEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHccHHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGGGTTccccEEEEccccccccTTcHHGGcccTTcHH DISOP:02AL 1-4, 6-10, 265-276| PSIPRED ccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHccEEEEEEcccccccccHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccEEEccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccEEEEEcccEEEEcccccccccccHHccc //