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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57196.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  187/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.23.5
:226 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   83->151 2vzjA PDBj 1e-14 49.3 %
:RPS:PDB   50->160 3brcA PDBj 2e-09 9.0 %
:RPS:SCOP  55->164 1rttA  c.23.5.4 * 3e-11 20.2 %
:HMM:SCOP  1->219 2fzvA1 c.23.5.4 * 5.6e-25 31.2 %
:RPS:PFM   50->161 PF03358 * FMN_red 1e-10 37.5 %
:HMM:PFM   4->170 PF03358 * FMN_red 5e-44 42.4 144/146  
:BLT:SWISS 60->197 MSUE_PSEAE 6e-20 37.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57196.1 GT:GENE BAD57196.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2515136..2515816 GB:FROM 2515136 GB:TO 2515816 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57196.1 LENGTH 226 SQ:AASEQ MTDTRIAVISAGLSQPSSTRLLADRLAAATARSLTERAREAEVAGPGFTGAEFNGAEFTVIELRDHAHDLANNLVTGFPSPALREVTEAVTTASGLIAVTPIFNASYSGLFKTFFDVLEPDSLTGMPVLLGATGGTERHSLALEHALRPMLAYLRSIVVPTAVYAASADWGGGDAGEGLDRRIDRAAGELAELVAGRVGARSADPDPADPYEETVPFEDLLAGRLG GT:EXON 1|1-226:0| BL:SWS:NREP 1 BL:SWS:REP 60->197|MSUE_PSEAE|6e-20|37.0|138/186| SEG 17->42|sstrlladrlaaatarslterareae| SEG 165->180|aasadwgggdagegld| BL:PDB:NREP 1 BL:PDB:REP 83->151|2vzjA|1e-14|49.3|69/187| RP:PDB:NREP 1 RP:PDB:REP 50->160|3brcA|2e-09|9.0|111/148| RP:PFM:NREP 1 RP:PFM:REP 50->161|PF03358|1e-10|37.5|112/149|FMN_red| HM:PFM:NREP 1 HM:PFM:REP 4->170|PF03358|5e-44|42.4|144/146|FMN_red| RP:SCP:NREP 1 RP:SCP:REP 55->164|1rttA|3e-11|20.2|109/174|c.23.5.4| HM:SCP:REP 1->219|2fzvA1|5.6e-25|31.2|192/0|c.23.5.4|1/1|Flavoproteins| OP:NHOMO 222 OP:NHOMOORG 188 OP:PATTERN -------------------------------------------------------------------- ----2111111-11----------------------11-----111111--2111111----1-2112111-----------1---------------------------------------------------------------------111-----------11-1----------------------------------------1---------132------1----------------------1------------------1----------------------------------------------------------------------------------------------------------------------------------------1-1121131221--111-1--21311-------1-1---------------------------------------------------------11--1111111----11--------11-2112--111-12--22-11--1--112---------------------------------------------------------------------------------------------------------------------1111-111111111111-1111111111111111111111---------------------11111111---111111-111----------------------------------1111111---112222122212221-1-1------------------------2221111111--------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 120 STR:RPRED 53.1 SQ:SECSTR ############################################cTTcETTccccccHHHHHHHHHHcEEEccccHHHHHHHHHHHHTTccccEEcccccGGGGGccHHHHHHHHHHHHcccTTccEEEEETTccEEEEEEccTTTcccHHHHHHHHHHHcTTc############################################################## DISOP:02AL 209-210, 223-226| PSIPRED ccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEccHHcccccccccccccccHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHccHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHcccEEccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccc //