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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57198.1
DDBJ      :             putative histidine kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  36/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:462 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   166->267 3bk9F PDBj 4e-09 8.8 %
:RPS:PDB   259->371 2dvyD PDBj 2e-05 9.0 %
:RPS:SCOP  250->356 1mu5A3  d.122.1.2 * 9e-05 10.8 %
:HMM:SCOP  205->363 1gkzA2 d.122.1.4 * 2e-08 14.6 %
:HMM:PFM   248->356 PF02518 * HATPase_c 1.2e-08 16.3 104/111  
:HMM:PFM   10->64 PF01384 * PHO4 0.0007 19.0 42/319  
:BLT:SWISS 246->298 CUSS_ECO57 4e-04 41.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57198.1 GT:GENE BAD57198.1 GT:PRODUCT putative histidine kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2516973..2518361 GB:FROM 2516973 GB:TO 2518361 GB:DIRECTION + GB:PRODUCT putative histidine kinase GB:PROTEIN_ID BAD57198.1 LENGTH 462 SQ:AASEQ MTREQMNLDIAVVLPWILAPVLVLAVAVYASVAIRKERARVEELTREQGARDEALERFASQTVPALTEAIRRHDAPNVTVEVPVALQNSRFAQVLNWTGERYVDGLRLVQAETADRVGAEAEARTRQAVEAAEEAVRASAREATSGAVRSFGTSVVSLGADVSQVVSAALRAHRDDEVYATLTRIDHTVQQMIRQAQSYVIVCGGLPGRRWPAQTLTDVVGGATGRVRDYLRVRANQSDRVVISRAVEPLVHTLATLLDNALRYSPPTSFVDVTFQEGHHGVTVIVDDAGVRMNSEQMEEARQVLAGERSVDIHQLGPSPKVGFPGIAALARRYGFTVYIDGPNAYGGMRAMVYIPEALLQPQKASESSEDVVEEPAPAREPVAVAAARTDEGEEKQFAVHEITQGGLPKRRRRAVAPAIGARPRRTGTEATPGRPDIAAAWHAGSKSGRAAATEHTEGTTP GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 246->298|CUSS_ECO57|4e-04|41.5|53/100| TM:NTM 1 TM:REGION 9->31| SEG 11->33|avvlpwilapvlvlavavyasva| SEG 119->145|aeaeartrqaveaaeeavrasareats| SEG 372->389|vveepaparepvavaaar| RP:PDB:NREP 2 RP:PDB:REP 166->267|3bk9F|4e-09|8.8|102/250| RP:PDB:REP 259->371|2dvyD|2e-05|9.0|111/214| HM:PFM:NREP 2 HM:PFM:REP 248->356|PF02518|1.2e-08|16.3|104/111|HATPase_c| HM:PFM:REP 10->64|PF01384|0.0007|19.0|42/319|PHO4| RP:SCP:NREP 1 RP:SCP:REP 250->356|1mu5A3|9e-05|10.8|102/218|d.122.1.2| HM:SCP:REP 205->363|1gkzA2|2e-08|14.6|158/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 115 OP:NHOMOORG 36 OP:PATTERN -------------------------------------------------------------------- ----8----------1111-1---1111111111117122-4361---1-----------64--564CC86---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 44.6 SQ:SECSTR #####################################################################################################################################################################HHTTccHHHHTTTGGGGTTccGGGcHHHHHHHHHHTcccGGGGTTTTTcHHHHHHHHHHHcccHHHHHHHHHTTccccTTccGGGHHHHHHHHHcTTTTHHHccEEEEccccTTcccEEEEccTTccEEccTTTccccccEEEEcccccccTTccccTHHHHHHHHHTTTcccHHHHTTHHHHHccHTccccHHHHccEEEEEEEE########################################################################################### DISOP:02AL 1-4, 162-174, 307-320, 359-462| PSIPRED ccccHHccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccHHHHHHHHHHHHHHHHccEEccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccEEEEEEcccccEEEEEEEEcHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //